Gene info for HMPREF1078_RS17475 in Parabacteroides merdae CL09T00C40

Annotation: nucleotide sugar dehydrogenase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976531, + strand, nucleotides 49,686 to 50,975
See nucleotide sequence around HMPREF1078_RS17475 or for all of scaffold NZ_JH976531

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS20110 and HMPREF1078_RS17455 are separated by 143 nucleotidesHMPREF1078_RS17455 and HMPREF1078_RS17460 overlap by 4 nucleotidesHMPREF1078_RS17460 and HMPREF1078_RS17465 are separated by 1 nucleotidesHMPREF1078_RS17465 and HMPREF1078_RS17470 overlap by 4 nucleotidesHMPREF1078_RS17470 and HMPREF1078_RS17475 are separated by 0 nucleotidesHMPREF1078_RS17475 and HMPREF1078_RS17480 are separated by 1 nucleotidesHMPREF1078_RS17480 and HMPREF1078_RS17485 are separated by 148 nucleotidesHMPREF1078_RS17485 and HMPREF1078_RS17490 are separated by 3 nucleotidesHMPREF1078_RS17490 and HMPREF1078_RS17495 overlap by 8 nucleotidesHMPREF1078_RS17495 and HMPREF1078_RS17505 are separated by 560 nucleotides HMPREF1078_RS20110: HMPREF1078_RS20110 - hypothetical protein, at 44,762 to 45,301 _RS20110 HMPREF1078_RS17455: HMPREF1078_RS17455 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 45,445 to 46,641 _RS17455 HMPREF1078_RS17460: HMPREF1078_RS17460 - glycosyltransferase family 4 protein, at 46,638 to 47,849 _RS17460 HMPREF1078_RS17465: HMPREF1078_RS17465 - glycosyltransferase, at 47,851 to 48,858 _RS17465 HMPREF1078_RS17470: HMPREF1078_RS17470 - alpha-1,2-fucosyltransferase, at 48,855 to 49,685 _RS17470 HMPREF1078_RS17475: HMPREF1078_RS17475 - nucleotide sugar dehydrogenase, at 49,686 to 50,975 _RS17475 HMPREF1078_RS17480: HMPREF1078_RS17480 - glycosyltransferase, at 50,977 to 51,882 _RS17480 HMPREF1078_RS17485: HMPREF1078_RS17485 - glycosyl transferase, at 52,031 to 52,846 _RS17485 HMPREF1078_RS17490: HMPREF1078_RS17490 - FdtA/QdtA family cupin domain-containing protein, at 52,850 to 53,215 _RS17490 HMPREF1078_RS17495: HMPREF1078_RS17495 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 53,208 to 54,287 _RS17495 HMPREF1078_RS17505: HMPREF1078_RS17505 - glucosaminidase domain-containing protein, at 54,848 to 55,300 _RS17505
Locus Name Description Strand Phenotype
HMPREF1078_RS20110 HMPREF1078_RS20110 hypothetical protein + cofit
HMPREF1078_RS17455 HMPREF1078_RS17455 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) + cofit
HMPREF1078_RS17460 HMPREF1078_RS17460 glycosyltransferase family 4 protein + strong
HMPREF1078_RS17465 HMPREF1078_RS17465 glycosyltransferase + cofit
HMPREF1078_RS17470 HMPREF1078_RS17470 alpha-1,2-fucosyltransferase + cofit
HMPREF1078_RS17475 HMPREF1078_RS17475 nucleotide sugar dehydrogenase + strong
HMPREF1078_RS17480 HMPREF1078_RS17480 glycosyltransferase + strong
HMPREF1078_RS17485 HMPREF1078_RS17485 glycosyl transferase + strong
HMPREF1078_RS17490 HMPREF1078_RS17490 FdtA/QdtA family cupin domain-containing protein + strong
HMPREF1078_RS17495 HMPREF1078_RS17495 DegT/DnrJ/EryC1/StrS family aminotransferase + strong
HMPREF1078_RS17505 HMPREF1078_RS17505 glucosaminidase domain-containing protein - insig.

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