Gene info for HMPREF1078_RS17355 in Parabacteroides merdae CL09T00C40

Annotation: AI-2E family transporter
Type 1: Protein-coding gene
Located on scaffold NZ_JH976531, - strand, nucleotides 24,038 to 25,186
See nucleotide sequence around HMPREF1078_RS17355 or for all of scaffold NZ_JH976531

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17325 and HMPREF1078_RS17330 are separated by 11 nucleotidesHMPREF1078_RS17330 and HMPREF1078_RS17335 are separated by 854 nucleotidesHMPREF1078_RS17335 and HMPREF1078_RS17340 are separated by 453 nucleotidesHMPREF1078_RS17340 and HMPREF1078_RS17350 are separated by 436 nucleotidesHMPREF1078_RS17350 and HMPREF1078_RS17355 are separated by 78 nucleotidesHMPREF1078_RS17355 and HMPREF1078_RS17360 are separated by 89 nucleotidesHMPREF1078_RS17360 and HMPREF1078_RS17365 are separated by 54 nucleotidesHMPREF1078_RS17365 and HMPREF1078_RS17370 are separated by 42 nucleotidesHMPREF1078_RS17370 and HMPREF1078_RS17375 are separated by 264 nucleotidesHMPREF1078_RS17375 and HMPREF1078_RS17380 are separated by 108 nucleotides HMPREF1078_RS17325: HMPREF1078_RS17325 - RagB/SusD family nutrient uptake outer membrane protein, at 14,471 to 16,300 _RS17325 HMPREF1078_RS17330: HMPREF1078_RS17330 - TonB-dependent receptor, at 16,312 to 19,440 _RS17330 HMPREF1078_RS17335: HMPREF1078_RS17335 - cation:proton antiporter, at 20,295 to 22,562 _RS17335 HMPREF1078_RS17340: HMPREF1078_RS17340 - copper resistance protein NlpE, at 23,016 to 23,447 _RS17340 HMPREF1078_RS17350: HMPREF1078_RS17350 - tRNA-Lys, at 23,884 to 23,959 _RS17350 HMPREF1078_RS17355: HMPREF1078_RS17355 - AI-2E family transporter, at 24,038 to 25,186 _RS17355 HMPREF1078_RS17360: HMPREF1078_RS17360 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 25,276 to 26,733 _RS17360 HMPREF1078_RS17365: HMPREF1078_RS17365 - LytTR family DNA-binding domain-containing protein, at 26,788 to 27,501 _RS17365 HMPREF1078_RS17370: HMPREF1078_RS17370 - histidine kinase, at 27,544 to 28,593 _RS17370 HMPREF1078_RS17375: HMPREF1078_RS17375 - ABC transporter permease, at 28,858 to 30,078 _RS17375 HMPREF1078_RS17380: HMPREF1078_RS17380 - ABC transporter ATP-binding protein, at 30,187 to 30,927 _RS17380
Locus Name Description Strand Phenotype
HMPREF1078_RS17325 HMPREF1078_RS17325 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1078_RS17330 HMPREF1078_RS17330 TonB-dependent receptor - insig.
HMPREF1078_RS17335 HMPREF1078_RS17335 cation:proton antiporter - insig.
HMPREF1078_RS17340 HMPREF1078_RS17340 copper resistance protein NlpE + insig.
HMPREF1078_RS17350 HMPREF1078_RS17350 tRNA-Lys - no data
HMPREF1078_RS17355 HMPREF1078_RS17355 AI-2E family transporter - insig.
HMPREF1078_RS17360 HMPREF1078_RS17360 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase + insig.
HMPREF1078_RS17365 HMPREF1078_RS17365 LytTR family DNA-binding domain-containing protein - insig.
HMPREF1078_RS17370 HMPREF1078_RS17370 histidine kinase - cofit
HMPREF1078_RS17375 HMPREF1078_RS17375 ABC transporter permease - insig.
HMPREF1078_RS17380 HMPREF1078_RS17380 ABC transporter ATP-binding protein - insig.

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