Gene info for HMPREF1078_RS17235 in Parabacteroides merdae CL09T00C40

Annotation: ribosome biogenesis GTPase Der
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, - strand, nucleotides 164,342 to 165,655
See nucleotide sequence around HMPREF1078_RS17235 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17210 and HMPREF1078_RS17215 are separated by 294 nucleotidesHMPREF1078_RS17215 and HMPREF1078_RS17220 overlap by 4 nucleotidesHMPREF1078_RS17220 and HMPREF1078_RS17225 are separated by 109 nucleotidesHMPREF1078_RS17225 and HMPREF1078_RS17230 are separated by 88 nucleotidesHMPREF1078_RS17230 and HMPREF1078_RS17235 are separated by 36 nucleotidesHMPREF1078_RS17235 and HMPREF1078_RS17240 are separated by 28 nucleotidesHMPREF1078_RS17240 and HMPREF1078_RS17245 overlap by 17 nucleotidesHMPREF1078_RS17245 and HMPREF1078_RS19035 are separated by 105 nucleotidesHMPREF1078_RS19035 and HMPREF1078_RS17250 are separated by 12 nucleotidesHMPREF1078_RS17250 and HMPREF1078_RS17255 are separated by 88 nucleotides HMPREF1078_RS17210: HMPREF1078_RS17210 - ABC transporter ATP-binding protein, at 158,569 to 160,416 _RS17210 HMPREF1078_RS17215: HMPREF1078_RS17215 - radical SAM-associated putative lipoprotein, at 160,711 to 161,187 _RS17215 HMPREF1078_RS17220: HMPREF1078_RS17220 - TIGR04133 family radical SAM/SPASM protein, at 161,184 to 162,257 _RS17220 HMPREF1078_RS17225: HMPREF1078_RS17225 - DUF4091 domain-containing protein, at 162,367 to 164,142 _RS17225 HMPREF1078_RS17230: HMPREF1078_RS17230 - tRNA-Val, at 164,231 to 164,305 _RS17230 HMPREF1078_RS17235: HMPREF1078_RS17235 - ribosome biogenesis GTPase Der, at 164,342 to 165,655 _RS17235 HMPREF1078_RS17240: HMPREF1078_RS17240 - GTPase Era, at 165,684 to 166,574 _RS17240 HMPREF1078_RS17245: HMPREF1078_RS17245 - beta-ketoacyl-ACP synthase III, at 166,558 to 167,562 _RS17245 HMPREF1078_RS19035: HMPREF1078_RS19035 - 50S ribosomal protein L32, at 167,668 to 167,853 _RS19035 HMPREF1078_RS17250: HMPREF1078_RS17250 - DUF177 domain-containing protein, at 167,866 to 168,453 _RS17250 HMPREF1078_RS17255: HMPREF1078_RS17255 - HAMP domain-containing sensor histidine kinase, at 168,542 to 169,696 _RS17255
Locus Name Description Strand Phenotype
HMPREF1078_RS17210 HMPREF1078_RS17210 ABC transporter ATP-binding protein - no data
HMPREF1078_RS17215 HMPREF1078_RS17215 radical SAM-associated putative lipoprotein + insig.
HMPREF1078_RS17220 HMPREF1078_RS17220 TIGR04133 family radical SAM/SPASM protein + sig.
HMPREF1078_RS17225 HMPREF1078_RS17225 DUF4091 domain-containing protein + insig.
HMPREF1078_RS17230 HMPREF1078_RS17230 tRNA-Val + no data
HMPREF1078_RS17235 HMPREF1078_RS17235 ribosome biogenesis GTPase Der - no data
HMPREF1078_RS17240 HMPREF1078_RS17240 GTPase Era - no data
HMPREF1078_RS17245 HMPREF1078_RS17245 beta-ketoacyl-ACP synthase III - no data
HMPREF1078_RS19035 HMPREF1078_RS19035 50S ribosomal protein L32 - no data
HMPREF1078_RS17250 HMPREF1078_RS17250 DUF177 domain-containing protein - no data
HMPREF1078_RS17255 HMPREF1078_RS17255 HAMP domain-containing sensor histidine kinase - strong

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