Gene info for HMPREF1078_RS17225 in Parabacteroides merdae CL09T00C40

Annotation: DUF4091 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, + strand, nucleotides 162,367 to 164,142
See nucleotide sequence around HMPREF1078_RS17225 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17200 and HMPREF1078_RS17205 are separated by 8 nucleotidesHMPREF1078_RS17205 and HMPREF1078_RS17210 are separated by 46 nucleotidesHMPREF1078_RS17210 and HMPREF1078_RS17215 are separated by 294 nucleotidesHMPREF1078_RS17215 and HMPREF1078_RS17220 overlap by 4 nucleotidesHMPREF1078_RS17220 and HMPREF1078_RS17225 are separated by 109 nucleotidesHMPREF1078_RS17225 and HMPREF1078_RS17230 are separated by 88 nucleotidesHMPREF1078_RS17230 and HMPREF1078_RS17235 are separated by 36 nucleotidesHMPREF1078_RS17235 and HMPREF1078_RS17240 are separated by 28 nucleotidesHMPREF1078_RS17240 and HMPREF1078_RS17245 overlap by 17 nucleotidesHMPREF1078_RS17245 and HMPREF1078_RS19035 are separated by 105 nucleotides HMPREF1078_RS17200: HMPREF1078_RS17200 - glycoside hydrolase family 95 protein, at 154,990 to 157,419 _RS17200 HMPREF1078_RS17205: HMPREF1078_RS17205 - cellulase family glycosylhydrolase, at 157,428 to 158,522 _RS17205 HMPREF1078_RS17210: HMPREF1078_RS17210 - ABC transporter ATP-binding protein, at 158,569 to 160,416 _RS17210 HMPREF1078_RS17215: HMPREF1078_RS17215 - radical SAM-associated putative lipoprotein, at 160,711 to 161,187 _RS17215 HMPREF1078_RS17220: HMPREF1078_RS17220 - TIGR04133 family radical SAM/SPASM protein, at 161,184 to 162,257 _RS17220 HMPREF1078_RS17225: HMPREF1078_RS17225 - DUF4091 domain-containing protein, at 162,367 to 164,142 _RS17225 HMPREF1078_RS17230: HMPREF1078_RS17230 - tRNA-Val, at 164,231 to 164,305 _RS17230 HMPREF1078_RS17235: HMPREF1078_RS17235 - ribosome biogenesis GTPase Der, at 164,342 to 165,655 _RS17235 HMPREF1078_RS17240: HMPREF1078_RS17240 - GTPase Era, at 165,684 to 166,574 _RS17240 HMPREF1078_RS17245: HMPREF1078_RS17245 - beta-ketoacyl-ACP synthase III, at 166,558 to 167,562 _RS17245 HMPREF1078_RS19035: HMPREF1078_RS19035 - 50S ribosomal protein L32, at 167,668 to 167,853 _RS19035
Locus Name Description Strand Phenotype
HMPREF1078_RS17200 HMPREF1078_RS17200 glycoside hydrolase family 95 protein - cofit
HMPREF1078_RS17205 HMPREF1078_RS17205 cellulase family glycosylhydrolase - cofit
HMPREF1078_RS17210 HMPREF1078_RS17210 ABC transporter ATP-binding protein - no data
HMPREF1078_RS17215 HMPREF1078_RS17215 radical SAM-associated putative lipoprotein + insig.
HMPREF1078_RS17220 HMPREF1078_RS17220 TIGR04133 family radical SAM/SPASM protein + sig.
HMPREF1078_RS17225 HMPREF1078_RS17225 DUF4091 domain-containing protein + insig.
HMPREF1078_RS17230 HMPREF1078_RS17230 tRNA-Val + no data
HMPREF1078_RS17235 HMPREF1078_RS17235 ribosome biogenesis GTPase Der - no data
HMPREF1078_RS17240 HMPREF1078_RS17240 GTPase Era - no data
HMPREF1078_RS17245 HMPREF1078_RS17245 beta-ketoacyl-ACP synthase III - no data
HMPREF1078_RS19035 HMPREF1078_RS19035 50S ribosomal protein L32 - no data

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