Gene info for HMPREF1078_RS17110 in Parabacteroides merdae CL09T00C40

Annotation: tRNA pseudouridine(55) synthase TruB
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, - strand, nucleotides 132,313 to 133,023
See nucleotide sequence around HMPREF1078_RS17110 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17085 and HMPREF1078_RS17090 are separated by 140 nucleotidesHMPREF1078_RS17090 and HMPREF1078_RS17095 are separated by 259 nucleotidesHMPREF1078_RS17095 and HMPREF1078_RS17100 overlap by 4 nucleotidesHMPREF1078_RS17100 and HMPREF1078_RS17105 are separated by 12 nucleotidesHMPREF1078_RS17105 and HMPREF1078_RS17110 are separated by 36 nucleotidesHMPREF1078_RS17110 and HMPREF1078_RS17115 are separated by 2 nucleotidesHMPREF1078_RS17115 and HMPREF1078_RS17120 overlap by 4 nucleotidesHMPREF1078_RS17120 and HMPREF1078_RS17125 are separated by 4 nucleotidesHMPREF1078_RS17125 and HMPREF1078_RS17130 are separated by 422 nucleotidesHMPREF1078_RS17130 and HMPREF1078_RS17135 are separated by 1129 nucleotides HMPREF1078_RS17085: HMPREF1078_RS17085 - insulinase family protein, at 125,969 to 128,881 _RS17085 HMPREF1078_RS17090: HMPREF1078_RS17090 - methionine adenosyltransferase, at 129,022 to 130,308 _RS17090 HMPREF1078_RS17095: HMPREF1078_RS17095 - hypothetical protein, at 130,568 to 130,759 _RS17095 HMPREF1078_RS17100: HMPREF1078_RS17100 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 130,756 to 131,214 _RS17100 HMPREF1078_RS17105: HMPREF1078_RS17105 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 131,227 to 132,276 _RS17105 HMPREF1078_RS17110: HMPREF1078_RS17110 - tRNA pseudouridine(55) synthase TruB, at 132,313 to 133,023 _RS17110 HMPREF1078_RS17115: HMPREF1078_RS17115 - undecaprenyl-diphosphate phosphatase, at 133,026 to 133,826 _RS17115 HMPREF1078_RS17120: HMPREF1078_RS17120 - DUF3098 domain-containing protein, at 133,823 to 134,065 _RS17120 HMPREF1078_RS17125: HMPREF1078_RS17125 - permease-like cell division protein FtsX, at 134,070 to 134,948 _RS17125 HMPREF1078_RS17130: HMPREF1078_RS17130 - DUF6383 domain-containing protein, at 135,371 to 139,237 _RS17130 HMPREF1078_RS17135: HMPREF1078_RS17135 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 140,367 to 141,737 _RS17135
Locus Name Description Strand Phenotype
HMPREF1078_RS17085 HMPREF1078_RS17085 insulinase family protein - insig.
HMPREF1078_RS17090 HMPREF1078_RS17090 methionine adenosyltransferase - no data
HMPREF1078_RS17095 HMPREF1078_RS17095 hypothetical protein - insig.
HMPREF1078_RS17100 HMPREF1078_RS17100 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase - no data
HMPREF1078_RS17105 HMPREF1078_RS17105 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA - no data
HMPREF1078_RS17110 HMPREF1078_RS17110 tRNA pseudouridine(55) synthase TruB - sig.
HMPREF1078_RS17115 HMPREF1078_RS17115 undecaprenyl-diphosphate phosphatase - no data
HMPREF1078_RS17120 HMPREF1078_RS17120 DUF3098 domain-containing protein - no data
HMPREF1078_RS17125 HMPREF1078_RS17125 permease-like cell division protein FtsX - strong
HMPREF1078_RS17130 HMPREF1078_RS17130 DUF6383 domain-containing protein - insig.
HMPREF1078_RS17135 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB - cofit

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