Gene info for HMPREF1078_RS17075 in Parabacteroides merdae CL09T00C40

Annotation: ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, + strand, nucleotides 124,363 to 125,109
See nucleotide sequence around HMPREF1078_RS17075 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17050 and HMPREF1078_RS17055 are separated by 186 nucleotidesHMPREF1078_RS17055 and HMPREF1078_RS17060 are separated by 325 nucleotidesHMPREF1078_RS17060 and HMPREF1078_RS17065 are separated by 69 nucleotidesHMPREF1078_RS17065 and HMPREF1078_RS17070 overlap by 4 nucleotidesHMPREF1078_RS17070 and HMPREF1078_RS17075 are separated by 184 nucleotidesHMPREF1078_RS17075 and HMPREF1078_RS17080 are separated by 3 nucleotidesHMPREF1078_RS17080 and HMPREF1078_RS17085 are separated by 67 nucleotidesHMPREF1078_RS17085 and HMPREF1078_RS17090 are separated by 140 nucleotidesHMPREF1078_RS17090 and HMPREF1078_RS17095 are separated by 259 nucleotidesHMPREF1078_RS17095 and HMPREF1078_RS17100 overlap by 4 nucleotides HMPREF1078_RS17050: HMPREF1078_RS17050 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 119,679 to 120,344 _RS17050 HMPREF1078_RS17055: HMPREF1078_RS17055 - trigger factor, at 120,531 to 121,886 _RS17055 HMPREF1078_RS17060: HMPREF1078_RS17060 - RNA-binding protein, at 122,212 to 122,454 _RS17060 HMPREF1078_RS17065: HMPREF1078_RS17065 - CPBP family intramembrane metalloprotease, at 122,524 to 123,429 _RS17065 HMPREF1078_RS17070: HMPREF1078_RS17070 - LPS export ABC transporter ATP-binding protein, at 123,426 to 124,178 _RS17070 HMPREF1078_RS17075: HMPREF1078_RS17075 - ABC transporter permease, at 124,363 to 125,109 _RS17075 HMPREF1078_RS17080: HMPREF1078_RS17080 - ATP-binding cassette domain-containing protein, at 125,113 to 125,901 _RS17080 HMPREF1078_RS17085: HMPREF1078_RS17085 - insulinase family protein, at 125,969 to 128,881 _RS17085 HMPREF1078_RS17090: HMPREF1078_RS17090 - methionine adenosyltransferase, at 129,022 to 130,308 _RS17090 HMPREF1078_RS17095: HMPREF1078_RS17095 - hypothetical protein, at 130,568 to 130,759 _RS17095 HMPREF1078_RS17100: HMPREF1078_RS17100 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 130,756 to 131,214 _RS17100
Locus Name Description Strand Phenotype
HMPREF1078_RS17050 HMPREF1078_RS17050 ATP-dependent Clp endopeptidase proteolytic subunit ClpP - strong
HMPREF1078_RS17055 HMPREF1078_RS17055 trigger factor - cofit
HMPREF1078_RS17060 HMPREF1078_RS17060 RNA-binding protein + insig.
HMPREF1078_RS17065 HMPREF1078_RS17065 CPBP family intramembrane metalloprotease + strong
HMPREF1078_RS17070 HMPREF1078_RS17070 LPS export ABC transporter ATP-binding protein - no data
HMPREF1078_RS17075 HMPREF1078_RS17075 ABC transporter permease + strong
HMPREF1078_RS17080 HMPREF1078_RS17080 ATP-binding cassette domain-containing protein + strong
HMPREF1078_RS17085 HMPREF1078_RS17085 insulinase family protein - cofit
HMPREF1078_RS17090 HMPREF1078_RS17090 methionine adenosyltransferase - no data
HMPREF1078_RS17095 HMPREF1078_RS17095 hypothetical protein - insig.
HMPREF1078_RS17100 HMPREF1078_RS17100 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase - no data

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