Gene info for HMPREF1078_RS16640 in Parabacteroides merdae CL09T00C40

Annotation: 3-isopropylmalate dehydrogenase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, - strand, nucleotides 39,549 to 40,607
See nucleotide sequence around HMPREF1078_RS16640 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS16615 and HMPREF1078_RS16620 are separated by 159 nucleotidesHMPREF1078_RS16620 and HMPREF1078_RS16625 are separated by 81 nucleotidesHMPREF1078_RS16625 and HMPREF1078_RS16630 are separated by 366 nucleotidesHMPREF1078_RS16630 and HMPREF1078_RS16635 are separated by 220 nucleotidesHMPREF1078_RS16635 and HMPREF1078_RS16640 are separated by 73 nucleotidesHMPREF1078_RS16640 and HMPREF1078_RS16645 are separated by 32 nucleotidesHMPREF1078_RS16645 and HMPREF1078_RS16650 are separated by 102 nucleotidesHMPREF1078_RS16650 and HMPREF1078_RS16655 are separated by 48 nucleotidesHMPREF1078_RS16655 and HMPREF1078_RS16660 are separated by 27 nucleotidesHMPREF1078_RS16660 and HMPREF1078_RS16665 are separated by 10 nucleotides HMPREF1078_RS16615: HMPREF1078_RS16615 - HD domain-containing protein, at 32,257 to 33,690 _RS16615 HMPREF1078_RS16620: HMPREF1078_RS16620 - hypothetical protein, at 33,850 to 34,680 _RS16620 HMPREF1078_RS16625: HMPREF1078_RS16625 - DUF6383 domain-containing protein, at 34,762 to 37,278 _RS16625 HMPREF1078_RS16630: HMPREF1078_RS16630 - mechanosensitive ion channel, at 37,645 to 38,427 _RS16630 HMPREF1078_RS16635: HMPREF1078_RS16635 - tetratricopeptide repeat protein, at 38,648 to 39,475 _RS16635 HMPREF1078_RS16640: HMPREF1078_RS16640 - 3-isopropylmalate dehydrogenase, at 39,549 to 40,607 _RS16640 HMPREF1078_RS16645: HMPREF1078_RS16645 - methylglyoxal synthase, at 40,640 to 41,083 _RS16645 HMPREF1078_RS16650: HMPREF1078_RS16650 - alpha-isopropylmalate synthase regulatory domain-containing protein, at 41,186 to 42,694 _RS16650 HMPREF1078_RS16655: HMPREF1078_RS16655 - 3-isopropylmalate dehydratase small subunit, at 42,743 to 43,330 _RS16655 HMPREF1078_RS16660: HMPREF1078_RS16660 - 3-isopropylmalate dehydratase large subunit, at 43,358 to 44,752 _RS16660 HMPREF1078_RS16665: HMPREF1078_RS16665 - 2-isopropylmalate synthase, at 44,763 to 46,259 _RS16665
Locus Name Description Strand Phenotype
HMPREF1078_RS16615 HMPREF1078_RS16615 HD domain-containing protein - no data
HMPREF1078_RS16620 HMPREF1078_RS16620 hypothetical protein + strong
HMPREF1078_RS16625 HMPREF1078_RS16625 DUF6383 domain-containing protein - cofit
HMPREF1078_RS16630 HMPREF1078_RS16630 mechanosensitive ion channel - cofit
HMPREF1078_RS16635 HMPREF1078_RS16635 tetratricopeptide repeat protein + insig.
HMPREF1078_RS16640 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase - strong
HMPREF1078_RS16645 HMPREF1078_RS16645 methylglyoxal synthase - strong
HMPREF1078_RS16650 HMPREF1078_RS16650 alpha-isopropylmalate synthase regulatory domain-containing protein - strong
HMPREF1078_RS16655 HMPREF1078_RS16655 3-isopropylmalate dehydratase small subunit - cofit
HMPREF1078_RS16660 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit - strong
HMPREF1078_RS16665 HMPREF1078_RS16665 2-isopropylmalate synthase - strong

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