Gene info for HMPREF1078_RS16580 in Parabacteroides merdae CL09T00C40

Annotation: alpha/beta hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976530, + strand, nucleotides 24,278 to 25,513
See nucleotide sequence around HMPREF1078_RS16580 or for all of scaffold NZ_JH976530

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS16555 and HMPREF1078_RS16560 overlap by 4 nucleotidesHMPREF1078_RS16560 and HMPREF1078_RS16565 are separated by 719 nucleotidesHMPREF1078_RS16565 and HMPREF1078_RS16570 are separated by 25 nucleotidesHMPREF1078_RS16570 and HMPREF1078_RS16575 are separated by 177 nucleotidesHMPREF1078_RS16575 and HMPREF1078_RS16580 are separated by 29 nucleotidesHMPREF1078_RS16580 and HMPREF1078_RS16585 are separated by 136 nucleotidesHMPREF1078_RS16585 and HMPREF1078_RS16590 are separated by 61 nucleotidesHMPREF1078_RS16590 and HMPREF1078_RS16595 are separated by 174 nucleotidesHMPREF1078_RS16595 and HMPREF1078_RS16600 are separated by 50 nucleotidesHMPREF1078_RS16600 and HMPREF1078_RS16605 are separated by 117 nucleotides HMPREF1078_RS16555: HMPREF1078_RS16555 - TIGR03915 family putative DNA repair protein, at 16,510 to 17,274 _RS16555 HMPREF1078_RS16560: HMPREF1078_RS16560 - putative DNA modification/repair radical SAM protein, at 17,271 to 18,539 _RS16560 HMPREF1078_RS16565: HMPREF1078_RS16565 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 19,259 to 20,290 _RS16565 HMPREF1078_RS16570: HMPREF1078_RS16570 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 20,316 to 23,297 _RS16570 HMPREF1078_RS16575: HMPREF1078_RS16575 - NIPSNAP family protein, at 23,475 to 24,248 _RS16575 HMPREF1078_RS16580: HMPREF1078_RS16580 - alpha/beta hydrolase, at 24,278 to 25,513 _RS16580 HMPREF1078_RS16585: HMPREF1078_RS16585 - 50S ribosomal protein L19, at 25,650 to 25,997 _RS16585 HMPREF1078_RS16590: HMPREF1078_RS16590 - DUF4301 family protein, at 26,059 to 27,579 _RS16590 HMPREF1078_RS16595: HMPREF1078_RS16595 - HD domain-containing protein, at 27,754 to 29,970 _RS16595 HMPREF1078_RS16600: HMPREF1078_RS16600 - AraC family transcriptional regulator, at 30,021 to 30,863 _RS16600 HMPREF1078_RS16605: HMPREF1078_RS16605 - DapH/DapD/GlmU-related protein, at 30,981 to 31,571 _RS16605
Locus Name Description Strand Phenotype
HMPREF1078_RS16555 HMPREF1078_RS16555 TIGR03915 family putative DNA repair protein - cofit
HMPREF1078_RS16560 HMPREF1078_RS16560 putative DNA modification/repair radical SAM protein - insig.
HMPREF1078_RS16565 HMPREF1078_RS16565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - strong
HMPREF1078_RS16570 HMPREF1078_RS16570 glycoside hydrolase family 3 N-terminal domain-containing protein - cofit
HMPREF1078_RS16575 HMPREF1078_RS16575 NIPSNAP family protein + insig.
HMPREF1078_RS16580 HMPREF1078_RS16580 alpha/beta hydrolase + insig.
HMPREF1078_RS16585 HMPREF1078_RS16585 50S ribosomal protein L19 + no data
HMPREF1078_RS16590 HMPREF1078_RS16590 DUF4301 family protein - sig.
HMPREF1078_RS16595 HMPREF1078_RS16595 HD domain-containing protein + strong
HMPREF1078_RS16600 HMPREF1078_RS16600 AraC family transcriptional regulator + insig.
HMPREF1078_RS16605 HMPREF1078_RS16605 DapH/DapD/GlmU-related protein + insig.

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