Gene info for HMPREF1078_RS16355 in Parabacteroides merdae CL09T00C40

Annotation: GH92 family glycosyl hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 405,229 to 407,556
See nucleotide sequence around HMPREF1078_RS16355 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS16330 and HMPREF1078_RS16335 are separated by 110 nucleotidesHMPREF1078_RS16335 and HMPREF1078_RS16340 are separated by 471 nucleotidesHMPREF1078_RS16340 and HMPREF1078_RS16345 are separated by 19 nucleotidesHMPREF1078_RS16345 and HMPREF1078_RS16350 are separated by 1155 nucleotidesHMPREF1078_RS16350 and HMPREF1078_RS16355 are separated by 18 nucleotidesHMPREF1078_RS16355 and HMPREF1078_RS16360 are separated by 17 nucleotidesHMPREF1078_RS16360 and HMPREF1078_RS16365 are separated by 146 nucleotidesHMPREF1078_RS16365 and HMPREF1078_RS16370 are separated by 118 nucleotidesHMPREF1078_RS16370 and HMPREF1078_RS16375 overlap by 4 nucleotidesHMPREF1078_RS16375 and HMPREF1078_RS16380 are separated by 1 nucleotides HMPREF1078_RS16330: HMPREF1078_RS16330 - redoxin domain-containing protein, at 392,383 to 393,501 _RS16330 HMPREF1078_RS16335: HMPREF1078_RS16335 - hybrid sensor histidine kinase/response regulator transcription factor, at 393,612 to 397,667 _RS16335 HMPREF1078_RS16340: HMPREF1078_RS16340 - SusC/RagA family TonB-linked outer membrane protein, at 398,139 to 401,135 _RS16340 HMPREF1078_RS16345: HMPREF1078_RS16345 - RagB/SusD family nutrient uptake outer membrane protein, at 401,155 to 402,948 _RS16345 HMPREF1078_RS16350: HMPREF1078_RS16350 - basic secretory protein-like protein, at 404,104 to 405,210 _RS16350 HMPREF1078_RS16355: HMPREF1078_RS16355 - GH92 family glycosyl hydrolase, at 405,229 to 407,556 _RS16355 HMPREF1078_RS16360: HMPREF1078_RS16360 - GH92 family glycosyl hydrolase, at 407,574 to 409,862 _RS16360 HMPREF1078_RS16365: HMPREF1078_RS16365 - GH92 family glycosyl hydrolase, at 410,009 to 412,333 _RS16365 HMPREF1078_RS16370: HMPREF1078_RS16370 - DUF262 domain-containing protein, at 412,452 to 413,600 _RS16370 HMPREF1078_RS16375: HMPREF1078_RS16375 - AAA family ATPase, at 413,597 to 414,619 _RS16375 HMPREF1078_RS16380: HMPREF1078_RS16380 - hypothetical protein, at 414,621 to 415,340 _RS16380
Locus Name Description Strand Phenotype
HMPREF1078_RS16330 HMPREF1078_RS16330 redoxin domain-containing protein - insig.
HMPREF1078_RS16335 HMPREF1078_RS16335 hybrid sensor histidine kinase/response regulator transcription factor + strong
HMPREF1078_RS16340 HMPREF1078_RS16340 SusC/RagA family TonB-linked outer membrane protein + strong
HMPREF1078_RS16345 HMPREF1078_RS16345 RagB/SusD family nutrient uptake outer membrane protein + strong
HMPREF1078_RS16350 HMPREF1078_RS16350 basic secretory protein-like protein + strong
HMPREF1078_RS16355 HMPREF1078_RS16355 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS16360 HMPREF1078_RS16360 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS16365 HMPREF1078_RS16365 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS16370 HMPREF1078_RS16370 DUF262 domain-containing protein + sig.
HMPREF1078_RS16375 HMPREF1078_RS16375 AAA family ATPase + insig.
HMPREF1078_RS16380 HMPREF1078_RS16380 hypothetical protein + insig.

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