Gene info for HMPREF1078_RS16170 in Parabacteroides merdae CL09T00C40

Annotation: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 358,746 to 359,933
See nucleotide sequence around HMPREF1078_RS16170 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS16145 and HMPREF1078_RS16150 overlap by 11 nucleotidesHMPREF1078_RS16150 and HMPREF1078_RS16155 overlap by 50 nucleotidesHMPREF1078_RS16155 and HMPREF1078_RS16160 are separated by 13 nucleotidesHMPREF1078_RS16160 and HMPREF1078_RS16165 overlap by 74 nucleotidesHMPREF1078_RS16165 and HMPREF1078_RS16170 are separated by 154 nucleotidesHMPREF1078_RS16170 and HMPREF1078_RS16175 are separated by 195 nucleotidesHMPREF1078_RS16175 and HMPREF1078_RS16180 overlap by 16 nucleotidesHMPREF1078_RS16180 and HMPREF1078_RS16185 are separated by 128 nucleotidesHMPREF1078_RS16185 and HMPREF1078_RS16190 are separated by 151 nucleotidesHMPREF1078_RS16190 and HMPREF1078_RS16200 are separated by 254 nucleotides HMPREF1078_RS16145: HMPREF1078_RS16145 - rod shape-determining protein MreD, at 352,879 to 353,397 _RS16145 HMPREF1078_RS16150: HMPREF1078_RS16150 - penicillin-binding protein 2, at 353,387 to 355,264 _RS16150 HMPREF1078_RS16155: HMPREF1078_RS16155 - rod shape-determining protein RodA, at 355,215 to 356,699 _RS16155 HMPREF1078_RS16160: HMPREF1078_RS16160 - gliding motility lipoprotein GldH, at 356,713 to 357,237 _RS16160 HMPREF1078_RS16165: HMPREF1078_RS16165 - regulatory iron-sulfur-containing complex subunit RicT, at 357,164 to 358,591 _RS16165 HMPREF1078_RS16170: HMPREF1078_RS16170 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 358,746 to 359,933 _RS16170 HMPREF1078_RS16175: HMPREF1078_RS16175 - diacylglycerol kinase family lipid kinase, at 360,129 to 361,100 _RS16175 HMPREF1078_RS16180: HMPREF1078_RS16180 - methyltransferase, at 361,085 to 361,801 _RS16180 HMPREF1078_RS16185: HMPREF1078_RS16185 - endopeptidase La, at 361,930 to 364,392 _RS16185 HMPREF1078_RS16190: HMPREF1078_RS16190 - transposase, at 364,544 to 365,693 _RS16190 HMPREF1078_RS16200: HMPREF1078_RS16200 - DUF5606 domain-containing protein, at 365,948 to 366,391 _RS16200
Locus Name Description Strand Phenotype
HMPREF1078_RS16145 HMPREF1078_RS16145 rod shape-determining protein MreD + no data
HMPREF1078_RS16150 HMPREF1078_RS16150 penicillin-binding protein 2 + no data
HMPREF1078_RS16155 HMPREF1078_RS16155 rod shape-determining protein RodA + no data
HMPREF1078_RS16160 HMPREF1078_RS16160 gliding motility lipoprotein GldH - strong
HMPREF1078_RS16165 HMPREF1078_RS16165 regulatory iron-sulfur-containing complex subunit RicT - strong
HMPREF1078_RS16170 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - no data
HMPREF1078_RS16175 HMPREF1078_RS16175 diacylglycerol kinase family lipid kinase + strong
HMPREF1078_RS16180 HMPREF1078_RS16180 methyltransferase - insig.
HMPREF1078_RS16185 HMPREF1078_RS16185 endopeptidase La + insig.
HMPREF1078_RS16190 HMPREF1078_RS16190 transposase + insig.
HMPREF1078_RS16200 HMPREF1078_RS16200 DUF5606 domain-containing protein - strong

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