Gene info for HMPREF1078_RS16145 in Parabacteroides merdae CL09T00C40

Annotation: rod shape-determining protein MreD
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 352,879 to 353,397
See nucleotide sequence around HMPREF1078_RS16145 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS16120 and HMPREF1078_RS16125 are separated by 516 nucleotidesHMPREF1078_RS16125 and HMPREF1078_RS16130 are separated by 162 nucleotidesHMPREF1078_RS16130 and HMPREF1078_RS16135 are separated by 107 nucleotidesHMPREF1078_RS16135 and HMPREF1078_RS16140 are separated by 100 nucleotidesHMPREF1078_RS16140 and HMPREF1078_RS16145 overlap by 8 nucleotidesHMPREF1078_RS16145 and HMPREF1078_RS16150 overlap by 11 nucleotidesHMPREF1078_RS16150 and HMPREF1078_RS16155 overlap by 50 nucleotidesHMPREF1078_RS16155 and HMPREF1078_RS16160 are separated by 13 nucleotidesHMPREF1078_RS16160 and HMPREF1078_RS16165 overlap by 74 nucleotidesHMPREF1078_RS16165 and HMPREF1078_RS16170 are separated by 154 nucleotides HMPREF1078_RS16120: HMPREF1078_RS16120 - outer membrane beta-barrel protein, at 347,502 to 348,413 _RS16120 HMPREF1078_RS16125: HMPREF1078_RS16125 - hypothetical protein, at 348,930 to 349,118 _RS16125 HMPREF1078_RS16130: HMPREF1078_RS16130 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 349,281 to 350,804 _RS16130 HMPREF1078_RS16135: HMPREF1078_RS16135 - rod shape-determining protein, at 350,912 to 351,931 _RS16135 HMPREF1078_RS16140: HMPREF1078_RS16140 - rod shape-determining protein MreC, at 352,032 to 352,886 _RS16140 HMPREF1078_RS16145: HMPREF1078_RS16145 - rod shape-determining protein MreD, at 352,879 to 353,397 _RS16145 HMPREF1078_RS16150: HMPREF1078_RS16150 - penicillin-binding protein 2, at 353,387 to 355,264 _RS16150 HMPREF1078_RS16155: HMPREF1078_RS16155 - rod shape-determining protein RodA, at 355,215 to 356,699 _RS16155 HMPREF1078_RS16160: HMPREF1078_RS16160 - gliding motility lipoprotein GldH, at 356,713 to 357,237 _RS16160 HMPREF1078_RS16165: HMPREF1078_RS16165 - regulatory iron-sulfur-containing complex subunit RicT, at 357,164 to 358,591 _RS16165 HMPREF1078_RS16170: HMPREF1078_RS16170 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 358,746 to 359,933 _RS16170
Locus Name Description Strand Phenotype
HMPREF1078_RS16120 HMPREF1078_RS16120 outer membrane beta-barrel protein + insig.
HMPREF1078_RS16125 HMPREF1078_RS16125 hypothetical protein + insig.
HMPREF1078_RS16130 HMPREF1078_RS16130 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase + strong
HMPREF1078_RS16135 HMPREF1078_RS16135 rod shape-determining protein + no data
HMPREF1078_RS16140 HMPREF1078_RS16140 rod shape-determining protein MreC + no data
HMPREF1078_RS16145 HMPREF1078_RS16145 rod shape-determining protein MreD + no data
HMPREF1078_RS16150 HMPREF1078_RS16150 penicillin-binding protein 2 + no data
HMPREF1078_RS16155 HMPREF1078_RS16155 rod shape-determining protein RodA + no data
HMPREF1078_RS16160 HMPREF1078_RS16160 gliding motility lipoprotein GldH - strong
HMPREF1078_RS16165 HMPREF1078_RS16165 regulatory iron-sulfur-containing complex subunit RicT - strong
HMPREF1078_RS16170 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - no data

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