Gene info for HMPREF1078_RS15955 in Parabacteroides merdae CL09T00C40

Annotation: winged helix DNA-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 311,705 to 312,070
See nucleotide sequence around HMPREF1078_RS15955 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15925 and HMPREF1078_RS15930 are separated by 22 nucleotidesHMPREF1078_RS15930 and HMPREF1078_RS15935 are separated by 77 nucleotidesHMPREF1078_RS15935 and HMPREF1078_RS15945 are separated by 606 nucleotidesHMPREF1078_RS15945 and HMPREF1078_RS15950 are separated by 179 nucleotidesHMPREF1078_RS15950 and HMPREF1078_RS15955 are separated by 64 nucleotidesHMPREF1078_RS15955 and HMPREF1078_RS15960 are separated by 189 nucleotidesHMPREF1078_RS15960 and HMPREF1078_RS15965 are separated by 85 nucleotidesHMPREF1078_RS15965 and HMPREF1078_RS15970 overlap by 4 nucleotidesHMPREF1078_RS15970 and HMPREF1078_RS15975 are separated by 691 nucleotidesHMPREF1078_RS15975 and HMPREF1078_RS15980 are separated by 227 nucleotides HMPREF1078_RS15925: HMPREF1078_RS15925 - 50S ribosomal protein L21, at 305,909 to 306,226 _RS15925 HMPREF1078_RS15930: HMPREF1078_RS15930 - 50S ribosomal protein L27, at 306,249 to 306,515 _RS15930 HMPREF1078_RS15935: HMPREF1078_RS15935 - NlpC/P60 family protein, at 306,593 to 307,135 _RS15935 HMPREF1078_RS15945: HMPREF1078_RS15945 - serine--tRNA ligase, at 307,742 to 309,016 _RS15945 HMPREF1078_RS15950: HMPREF1078_RS15950 - FAD-dependent oxidoreductase, at 309,196 to 311,640 _RS15950 HMPREF1078_RS15955: HMPREF1078_RS15955 - winged helix DNA-binding protein, at 311,705 to 312,070 _RS15955 HMPREF1078_RS15960: HMPREF1078_RS15960 - dihydroorotate dehydrogenase-like protein, at 312,260 to 313,237 _RS15960 HMPREF1078_RS15965: HMPREF1078_RS15965 - YggS family pyridoxal phosphate-dependent enzyme, at 313,323 to 313,991 _RS15965 HMPREF1078_RS15970: HMPREF1078_RS15970 - DUF4494 domain-containing protein, at 313,988 to 314,494 _RS15970 HMPREF1078_RS15975: HMPREF1078_RS15975 - master DNA invertase Mpi family serine-type recombinase, at 315,186 to 315,809 _RS15975 HMPREF1078_RS15980: HMPREF1078_RS15980 - bifunctional fucokinase/fucose-1-phosphate guanylyltransferase, at 316,037 to 318,883 _RS15980
Locus Name Description Strand Phenotype
HMPREF1078_RS15925 HMPREF1078_RS15925 50S ribosomal protein L21 + no data
HMPREF1078_RS15930 HMPREF1078_RS15930 50S ribosomal protein L27 + no data
HMPREF1078_RS15935 HMPREF1078_RS15935 NlpC/P60 family protein + cofit
HMPREF1078_RS15945 HMPREF1078_RS15945 serine--tRNA ligase + no data
HMPREF1078_RS15950 HMPREF1078_RS15950 FAD-dependent oxidoreductase - insig.
HMPREF1078_RS15955 HMPREF1078_RS15955 winged helix DNA-binding protein - insig.
HMPREF1078_RS15960 HMPREF1078_RS15960 dihydroorotate dehydrogenase-like protein - strong
HMPREF1078_RS15965 HMPREF1078_RS15965 YggS family pyridoxal phosphate-dependent enzyme - insig.
HMPREF1078_RS15970 HMPREF1078_RS15970 DUF4494 domain-containing protein - insig.
HMPREF1078_RS15975 HMPREF1078_RS15975 master DNA invertase Mpi family serine-type recombinase - insig.
HMPREF1078_RS15980 HMPREF1078_RS15980 bifunctional fucokinase/fucose-1-phosphate guanylyltransferase + insig.

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