Gene info for HMPREF1078_RS15915 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 298,643 to 301,975
See nucleotide sequence around HMPREF1078_RS15915 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15890 and HMPREF1078_RS15895 overlap by 44 nucleotidesHMPREF1078_RS15895 and HMPREF1078_RS15900 are separated by 6 nucleotidesHMPREF1078_RS15900 and HMPREF1078_RS15905 are separated by 90 nucleotidesHMPREF1078_RS15905 and HMPREF1078_RS15910 are separated by 198 nucleotidesHMPREF1078_RS15910 and HMPREF1078_RS15915 are separated by 19 nucleotidesHMPREF1078_RS15915 and HMPREF1078_RS15920 are separated by 1066 nucleotidesHMPREF1078_RS15920 and HMPREF1078_RS15925 are separated by 131 nucleotidesHMPREF1078_RS15925 and HMPREF1078_RS15930 are separated by 22 nucleotidesHMPREF1078_RS15930 and HMPREF1078_RS15935 are separated by 77 nucleotidesHMPREF1078_RS15935 and HMPREF1078_RS15945 are separated by 606 nucleotides HMPREF1078_RS15890: HMPREF1078_RS15890 - hypothetical protein, at 294,606 to 294,983 _RS15890 HMPREF1078_RS15895: HMPREF1078_RS15895 - phage holin family protein, at 294,940 to 295,350 _RS15895 HMPREF1078_RS15900: HMPREF1078_RS15900 - YtxH domain-containing protein, at 295,357 to 295,578 _RS15900 HMPREF1078_RS15905: HMPREF1078_RS15905 - 50S ribosomal protein L11 methyltransferase, at 295,669 to 296,520 _RS15905 HMPREF1078_RS15910: HMPREF1078_RS15910 - RagB/SusD family nutrient uptake outer membrane protein, at 296,719 to 298,623 _RS15910 HMPREF1078_RS15915: HMPREF1078_RS15915 - TonB-dependent receptor, at 298,643 to 301,975 _RS15915 HMPREF1078_RS15920: HMPREF1078_RS15920 - alpha-L-rhamnosidase, at 303,042 to 305,777 _RS15920 HMPREF1078_RS15925: HMPREF1078_RS15925 - 50S ribosomal protein L21, at 305,909 to 306,226 _RS15925 HMPREF1078_RS15930: HMPREF1078_RS15930 - 50S ribosomal protein L27, at 306,249 to 306,515 _RS15930 HMPREF1078_RS15935: HMPREF1078_RS15935 - NlpC/P60 family protein, at 306,593 to 307,135 _RS15935 HMPREF1078_RS15945: HMPREF1078_RS15945 - serine--tRNA ligase, at 307,742 to 309,016 _RS15945
Locus Name Description Strand Phenotype
HMPREF1078_RS15890 HMPREF1078_RS15890 hypothetical protein - insig.
HMPREF1078_RS15895 HMPREF1078_RS15895 phage holin family protein - insig.
HMPREF1078_RS15900 HMPREF1078_RS15900 YtxH domain-containing protein - insig.
HMPREF1078_RS15905 HMPREF1078_RS15905 50S ribosomal protein L11 methyltransferase - insig.
HMPREF1078_RS15910 HMPREF1078_RS15910 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS15915 HMPREF1078_RS15915 TonB-dependent receptor - insig.
HMPREF1078_RS15920 HMPREF1078_RS15920 alpha-L-rhamnosidase + insig.
HMPREF1078_RS15925 HMPREF1078_RS15925 50S ribosomal protein L21 + no data
HMPREF1078_RS15930 HMPREF1078_RS15930 50S ribosomal protein L27 + no data
HMPREF1078_RS15935 HMPREF1078_RS15935 NlpC/P60 family protein + cofit
HMPREF1078_RS15945 HMPREF1078_RS15945 serine--tRNA ligase + no data

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