Gene info for HMPREF1078_RS15895 in Parabacteroides merdae CL09T00C40

Annotation: phage holin family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 294,940 to 295,350
See nucleotide sequence around HMPREF1078_RS15895 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15870 and HMPREF1078_RS15875 are separated by 116 nucleotidesHMPREF1078_RS15875 and HMPREF1078_RS15880 are separated by 70 nucleotidesHMPREF1078_RS15880 and HMPREF1078_RS15885 are separated by 71 nucleotidesHMPREF1078_RS15885 and HMPREF1078_RS15890 are separated by 182 nucleotidesHMPREF1078_RS15890 and HMPREF1078_RS15895 overlap by 44 nucleotidesHMPREF1078_RS15895 and HMPREF1078_RS15900 are separated by 6 nucleotidesHMPREF1078_RS15900 and HMPREF1078_RS15905 are separated by 90 nucleotidesHMPREF1078_RS15905 and HMPREF1078_RS15910 are separated by 198 nucleotidesHMPREF1078_RS15910 and HMPREF1078_RS15915 are separated by 19 nucleotidesHMPREF1078_RS15915 and HMPREF1078_RS15920 are separated by 1066 nucleotides HMPREF1078_RS15870: HMPREF1078_RS15870 - Crp/Fnr family transcriptional regulator, at 290,729 to 291,430 _RS15870 HMPREF1078_RS15875: HMPREF1078_RS15875 - 3-deoxy-8-phosphooctulonate synthase, at 291,547 to 292,353 _RS15875 HMPREF1078_RS15880: HMPREF1078_RS15880 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 292,424 to 293,341 _RS15880 HMPREF1078_RS15885: HMPREF1078_RS15885 - type I glyceraldehyde-3-phosphate dehydrogenase, at 293,413 to 294,423 _RS15885 HMPREF1078_RS15890: HMPREF1078_RS15890 - hypothetical protein, at 294,606 to 294,983 _RS15890 HMPREF1078_RS15895: HMPREF1078_RS15895 - phage holin family protein, at 294,940 to 295,350 _RS15895 HMPREF1078_RS15900: HMPREF1078_RS15900 - YtxH domain-containing protein, at 295,357 to 295,578 _RS15900 HMPREF1078_RS15905: HMPREF1078_RS15905 - 50S ribosomal protein L11 methyltransferase, at 295,669 to 296,520 _RS15905 HMPREF1078_RS15910: HMPREF1078_RS15910 - RagB/SusD family nutrient uptake outer membrane protein, at 296,719 to 298,623 _RS15910 HMPREF1078_RS15915: HMPREF1078_RS15915 - TonB-dependent receptor, at 298,643 to 301,975 _RS15915 HMPREF1078_RS15920: HMPREF1078_RS15920 - alpha-L-rhamnosidase, at 303,042 to 305,777 _RS15920
Locus Name Description Strand Phenotype
HMPREF1078_RS15870 HMPREF1078_RS15870 Crp/Fnr family transcriptional regulator + no data
HMPREF1078_RS15875 HMPREF1078_RS15875 3-deoxy-8-phosphooctulonate synthase - no data
HMPREF1078_RS15880 HMPREF1078_RS15880 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA - cofit
HMPREF1078_RS15885 HMPREF1078_RS15885 type I glyceraldehyde-3-phosphate dehydrogenase - no data
HMPREF1078_RS15890 HMPREF1078_RS15890 hypothetical protein - insig.
HMPREF1078_RS15895 HMPREF1078_RS15895 phage holin family protein - insig.
HMPREF1078_RS15900 HMPREF1078_RS15900 YtxH domain-containing protein - insig.
HMPREF1078_RS15905 HMPREF1078_RS15905 50S ribosomal protein L11 methyltransferase - insig.
HMPREF1078_RS15910 HMPREF1078_RS15910 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS15915 HMPREF1078_RS15915 TonB-dependent receptor - insig.
HMPREF1078_RS15920 HMPREF1078_RS15920 alpha-L-rhamnosidase + insig.

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