Gene info for HMPREF1078_RS15850 in Parabacteroides merdae CL09T00C40

Annotation: PspC domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 285,344 to 285,547
See nucleotide sequence around HMPREF1078_RS15850 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15825 and HMPREF1078_RS15830 are separated by 18 nucleotidesHMPREF1078_RS15830 and HMPREF1078_RS15835 are separated by 93 nucleotidesHMPREF1078_RS15835 and HMPREF1078_RS15840 are separated by 51 nucleotidesHMPREF1078_RS15840 and HMPREF1078_RS15845 are separated by 232 nucleotidesHMPREF1078_RS15845 and HMPREF1078_RS15850 are separated by 75 nucleotidesHMPREF1078_RS15850 and HMPREF1078_RS15855 overlap by 4 nucleotidesHMPREF1078_RS15855 and HMPREF1078_RS15860 are separated by 14 nucleotidesHMPREF1078_RS15860 and HMPREF1078_RS15865 are separated by 2 nucleotidesHMPREF1078_RS15865 and HMPREF1078_RS15870 are separated by 129 nucleotidesHMPREF1078_RS15870 and HMPREF1078_RS15875 are separated by 116 nucleotides HMPREF1078_RS15825: HMPREF1078_RS15825 - ketoacyl-ACP synthase III, at 280,837 to 281,781 _RS15825 HMPREF1078_RS15830: HMPREF1078_RS15830 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 281,800 to 282,546 _RS15830 HMPREF1078_RS15835: HMPREF1078_RS15835 - pseudouridine synthase, at 282,640 to 283,317 _RS15835 HMPREF1078_RS15840: HMPREF1078_RS15840 - DMT family transporter, at 283,369 to 284,298 _RS15840 HMPREF1078_RS15845: HMPREF1078_RS15845 - copper homeostasis protein CutC, at 284,531 to 285,268 _RS15845 HMPREF1078_RS15850: HMPREF1078_RS15850 - PspC domain-containing protein, at 285,344 to 285,547 _RS15850 HMPREF1078_RS15855: HMPREF1078_RS15855 - excinuclease ABC subunit UvrB, at 285,544 to 287,571 _RS15855 HMPREF1078_RS15860: HMPREF1078_RS15860 - DUF1460 domain-containing protein, at 287,586 to 288,416 _RS15860 HMPREF1078_RS15865: HMPREF1078_RS15865 - DUF5686 family protein, at 288,419 to 290,599 _RS15865 HMPREF1078_RS15870: HMPREF1078_RS15870 - Crp/Fnr family transcriptional regulator, at 290,729 to 291,430 _RS15870 HMPREF1078_RS15875: HMPREF1078_RS15875 - 3-deoxy-8-phosphooctulonate synthase, at 291,547 to 292,353 _RS15875
Locus Name Description Strand Phenotype
HMPREF1078_RS15825 HMPREF1078_RS15825 ketoacyl-ACP synthase III + strong
HMPREF1078_RS15830 HMPREF1078_RS15830 3-oxoacyl-[acyl-carrier-protein] reductase + no data
HMPREF1078_RS15835 HMPREF1078_RS15835 pseudouridine synthase + sig.
HMPREF1078_RS15840 HMPREF1078_RS15840 DMT family transporter - insig.
HMPREF1078_RS15845 HMPREF1078_RS15845 copper homeostasis protein CutC + strong
HMPREF1078_RS15850 HMPREF1078_RS15850 PspC domain-containing protein + insig.
HMPREF1078_RS15855 HMPREF1078_RS15855 excinuclease ABC subunit UvrB + cofit
HMPREF1078_RS15860 HMPREF1078_RS15860 DUF1460 domain-containing protein + insig.
HMPREF1078_RS15865 HMPREF1078_RS15865 DUF5686 family protein - cofit
HMPREF1078_RS15870 HMPREF1078_RS15870 Crp/Fnr family transcriptional regulator + no data
HMPREF1078_RS15875 HMPREF1078_RS15875 3-deoxy-8-phosphooctulonate synthase - no data

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