Gene info for HMPREF1078_RS15510 in Parabacteroides merdae CL09T00C40

Annotation: ribonuclease Y
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 195,644 to 197,179
See nucleotide sequence around HMPREF1078_RS15510 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15480 and HMPREF1078_RS15490 are separated by 572 nucleotidesHMPREF1078_RS15490 and HMPREF1078_RS15495 are separated by 140 nucleotidesHMPREF1078_RS15495 and HMPREF1078_RS15500 are separated by 152 nucleotidesHMPREF1078_RS15500 and HMPREF1078_RS15505 are separated by 5 nucleotidesHMPREF1078_RS15505 and HMPREF1078_RS15510 are separated by 108 nucleotidesHMPREF1078_RS15510 and HMPREF1078_RS15515 are separated by 650 nucleotidesHMPREF1078_RS15515 and HMPREF1078_RS15520 are separated by 100 nucleotidesHMPREF1078_RS15520 and HMPREF1078_RS15525 are separated by 206 nucleotidesHMPREF1078_RS15525 and HMPREF1078_RS15530 are separated by 11 nucleotidesHMPREF1078_RS15530 and HMPREF1078_RS15535 are separated by 1074 nucleotides HMPREF1078_RS15480: HMPREF1078_RS15480 - peptidoglycan editing factor PgeF, at 192,321 to 193,187 _RS15480 HMPREF1078_RS15490: HMPREF1078_RS15490 - phenylalanine--tRNA ligase beta subunit-related protein, at 193,760 to 194,452 _RS15490 HMPREF1078_RS15495: HMPREF1078_RS15495 - winged helix-turn-helix domain-containing protein, at 194,593 to 194,793 _RS15495 HMPREF1078_RS15500: HMPREF1078_RS15500 - hypothetical protein, at 194,946 to 195,239 _RS15500 HMPREF1078_RS15505: HMPREF1078_RS15505 - cell division protein ZapA, at 195,245 to 195,535 _RS15505 HMPREF1078_RS15510: HMPREF1078_RS15510 - ribonuclease Y, at 195,644 to 197,179 _RS15510 HMPREF1078_RS15515: HMPREF1078_RS15515 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 197,830 to 201,207 _RS15515 HMPREF1078_RS15520: HMPREF1078_RS15520 - DUF3332 domain-containing protein, at 201,308 to 201,862 _RS15520 HMPREF1078_RS15525: HMPREF1078_RS15525 - RagB/SusD family nutrient uptake outer membrane protein, at 202,069 to 203,850 _RS15525 HMPREF1078_RS15530: HMPREF1078_RS15530 - TonB-dependent receptor, at 203,862 to 206,966 _RS15530 HMPREF1078_RS15535: HMPREF1078_RS15535 - TonB-dependent receptor, at 208,041 to 211,160 _RS15535
Locus Name Description Strand Phenotype
HMPREF1078_RS15480 HMPREF1078_RS15480 peptidoglycan editing factor PgeF + insig.
HMPREF1078_RS15490 HMPREF1078_RS15490 phenylalanine--tRNA ligase beta subunit-related protein + insig.
HMPREF1078_RS15495 HMPREF1078_RS15495 winged helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS15500 HMPREF1078_RS15500 hypothetical protein + no data
HMPREF1078_RS15505 HMPREF1078_RS15505 cell division protein ZapA + no data
HMPREF1078_RS15510 HMPREF1078_RS15510 ribonuclease Y + no data
HMPREF1078_RS15515 HMPREF1078_RS15515 glycoside hydrolase family 2 TIM barrel-domain containing protein - strong
HMPREF1078_RS15520 HMPREF1078_RS15520 DUF3332 domain-containing protein - cofit
HMPREF1078_RS15525 HMPREF1078_RS15525 RagB/SusD family nutrient uptake outer membrane protein - strong
HMPREF1078_RS15530 HMPREF1078_RS15530 TonB-dependent receptor - strong
HMPREF1078_RS15535 HMPREF1078_RS15535 TonB-dependent receptor + cofit

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