Gene info for HMPREF1078_RS15460 in Parabacteroides merdae CL09T00C40

Annotation: DUF3078 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 187,644 to 189,224
See nucleotide sequence around HMPREF1078_RS15460 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15435 and HMPREF1078_RS15440 are separated by 2 nucleotidesHMPREF1078_RS15440 and HMPREF1078_RS15445 are separated by 12 nucleotidesHMPREF1078_RS15445 and HMPREF1078_RS15450 are separated by 11 nucleotidesHMPREF1078_RS15450 and HMPREF1078_RS15455 are separated by 10 nucleotidesHMPREF1078_RS15455 and HMPREF1078_RS15460 are separated by 100 nucleotidesHMPREF1078_RS15460 and HMPREF1078_RS18950 are separated by 404 nucleotidesHMPREF1078_RS18950 and HMPREF1078_RS15465 are separated by 63 nucleotidesHMPREF1078_RS15465 and HMPREF1078_RS15470 are separated by 132 nucleotidesHMPREF1078_RS15470 and HMPREF1078_RS15475 are separated by 102 nucleotidesHMPREF1078_RS15475 and HMPREF1078_RS15480 overlap by 53 nucleotides HMPREF1078_RS15435: HMPREF1078_RS15435 - RnfABCDGE type electron transport complex subunit G, at 183,144 to 183,788 _RS15435 HMPREF1078_RS15440: HMPREF1078_RS15440 - RnfABCDGE type electron transport complex subunit D, at 183,791 to 184,750 _RS15440 HMPREF1078_RS15445: HMPREF1078_RS15445 - electron transport complex subunit RsxC, at 184,763 to 186,094 _RS15445 HMPREF1078_RS15450: HMPREF1078_RS15450 - Fe-S cluster domain-containing protein, at 186,106 to 187,116 _RS15450 HMPREF1078_RS15455: HMPREF1078_RS15455 - SoxR reducing system RseC family protein, at 187,127 to 187,543 _RS15455 HMPREF1078_RS15460: HMPREF1078_RS15460 - DUF3078 domain-containing protein, at 187,644 to 189,224 _RS15460 HMPREF1078_RS18950: HMPREF1078_RS18950 - ABC transporter ATP-binding protein, at 189,629 to 189,802 _RS18950 HMPREF1078_RS15465: HMPREF1078_RS15465 - hypoxanthine phosphoribosyltransferase, at 189,866 to 190,405 _RS15465 HMPREF1078_RS15470: HMPREF1078_RS15470 - adenylate kinase, at 190,538 to 191,107 _RS15470 HMPREF1078_RS15475: HMPREF1078_RS15475 - GTPase ObgE, at 191,210 to 192,373 _RS15475 HMPREF1078_RS15480: HMPREF1078_RS15480 - peptidoglycan editing factor PgeF, at 192,321 to 193,187 _RS15480
Locus Name Description Strand Phenotype
HMPREF1078_RS15435 HMPREF1078_RS15435 RnfABCDGE type electron transport complex subunit G - no data
HMPREF1078_RS15440 HMPREF1078_RS15440 RnfABCDGE type electron transport complex subunit D - no data
HMPREF1078_RS15445 HMPREF1078_RS15445 electron transport complex subunit RsxC - no data
HMPREF1078_RS15450 HMPREF1078_RS15450 Fe-S cluster domain-containing protein - insig.
HMPREF1078_RS15455 HMPREF1078_RS15455 SoxR reducing system RseC family protein - no data
HMPREF1078_RS15460 HMPREF1078_RS15460 DUF3078 domain-containing protein - strong
HMPREF1078_RS18950 HMPREF1078_RS18950 ABC transporter ATP-binding protein + insig.
HMPREF1078_RS15465 HMPREF1078_RS15465 hypoxanthine phosphoribosyltransferase + insig.
HMPREF1078_RS15470 HMPREF1078_RS15470 adenylate kinase + no data
HMPREF1078_RS15475 HMPREF1078_RS15475 GTPase ObgE + insig.
HMPREF1078_RS15480 HMPREF1078_RS15480 peptidoglycan editing factor PgeF + insig.

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