Gene info for HMPREF1078_RS15360 in Parabacteroides merdae CL09T00C40

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 160,269 to 161,807
See nucleotide sequence around HMPREF1078_RS15360 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15335 and HMPREF1078_RS15340 are separated by 262 nucleotidesHMPREF1078_RS15340 and HMPREF1078_RS15345 are separated by 11 nucleotidesHMPREF1078_RS15345 and HMPREF1078_RS15350 are separated by 11 nucleotidesHMPREF1078_RS15350 and HMPREF1078_RS15355 are separated by 88 nucleotidesHMPREF1078_RS15355 and HMPREF1078_RS15360 are separated by 29 nucleotidesHMPREF1078_RS15360 and HMPREF1078_RS15365 are separated by 29 nucleotidesHMPREF1078_RS15365 and HMPREF1078_RS15370 are separated by 1176 nucleotidesHMPREF1078_RS15370 and HMPREF1078_RS15375 are separated by 467 nucleotidesHMPREF1078_RS15375 and HMPREF1078_RS15380 are separated by 21 nucleotidesHMPREF1078_RS15380 and HMPREF1078_RS15385 are separated by 214 nucleotides HMPREF1078_RS15335: HMPREF1078_RS15335 - acetylglutamate kinase, at 153,541 to 154,308 _RS15335 HMPREF1078_RS15340: HMPREF1078_RS15340 - ATP-binding cassette domain-containing protein, at 154,571 to 156,040 _RS15340 HMPREF1078_RS15345: HMPREF1078_RS15345 - DUF6057 family protein, at 156,052 to 157,803 _RS15345 HMPREF1078_RS15350: HMPREF1078_RS15350 - PD40 domain-containing protein, at 157,815 to 159,278 _RS15350 HMPREF1078_RS15355: HMPREF1078_RS15355 - hypothetical protein, at 159,367 to 160,239 _RS15355 HMPREF1078_RS15360: HMPREF1078_RS15360 - RagB/SusD family nutrient uptake outer membrane protein, at 160,269 to 161,807 _RS15360 HMPREF1078_RS15365: HMPREF1078_RS15365 - TonB-dependent receptor, at 161,837 to 164,758 _RS15365 HMPREF1078_RS15370: HMPREF1078_RS15370 - carboxypeptidase-like regulatory domain-containing protein, at 165,935 to 166,222 _RS15370 HMPREF1078_RS15375: HMPREF1078_RS15375 - SusC/RagA family TonB-linked outer membrane protein, at 166,690 to 169,641 _RS15375 HMPREF1078_RS15380: HMPREF1078_RS15380 - RagB/SusD family nutrient uptake outer membrane protein, at 169,663 to 171,249 _RS15380 HMPREF1078_RS15385: HMPREF1078_RS15385 - site-specific integrase, at 171,464 to 172,633 _RS15385
Locus Name Description Strand Phenotype
HMPREF1078_RS15335 HMPREF1078_RS15335 acetylglutamate kinase + strong
HMPREF1078_RS15340 HMPREF1078_RS15340 ATP-binding cassette domain-containing protein + insig.
HMPREF1078_RS15345 HMPREF1078_RS15345 DUF6057 family protein + cofit
HMPREF1078_RS15350 HMPREF1078_RS15350 PD40 domain-containing protein + insig.
HMPREF1078_RS15355 HMPREF1078_RS15355 hypothetical protein - sig.
HMPREF1078_RS15360 HMPREF1078_RS15360 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1078_RS15365 HMPREF1078_RS15365 TonB-dependent receptor - cofit
HMPREF1078_RS15370 HMPREF1078_RS15370 carboxypeptidase-like regulatory domain-containing protein + strong
HMPREF1078_RS15375 HMPREF1078_RS15375 SusC/RagA family TonB-linked outer membrane protein + cofit
HMPREF1078_RS15380 HMPREF1078_RS15380 RagB/SusD family nutrient uptake outer membrane protein + cofit
HMPREF1078_RS15385 HMPREF1078_RS15385 site-specific integrase + strong

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