Gene info for HMPREF1078_RS15340 in Parabacteroides merdae CL09T00C40

Annotation: ATP-binding cassette domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 154,571 to 156,040
See nucleotide sequence around HMPREF1078_RS15340 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15315 and HMPREF1078_RS15320 are separated by 294 nucleotidesHMPREF1078_RS15320 and HMPREF1078_RS15325 are separated by 751 nucleotidesHMPREF1078_RS15325 and HMPREF1078_RS15330 are separated by 181 nucleotidesHMPREF1078_RS15330 and HMPREF1078_RS15335 are separated by 77 nucleotidesHMPREF1078_RS15335 and HMPREF1078_RS15340 are separated by 262 nucleotidesHMPREF1078_RS15340 and HMPREF1078_RS15345 are separated by 11 nucleotidesHMPREF1078_RS15345 and HMPREF1078_RS15350 are separated by 11 nucleotidesHMPREF1078_RS15350 and HMPREF1078_RS15355 are separated by 88 nucleotidesHMPREF1078_RS15355 and HMPREF1078_RS15360 are separated by 29 nucleotidesHMPREF1078_RS15360 and HMPREF1078_RS15365 are separated by 29 nucleotides HMPREF1078_RS15315: HMPREF1078_RS15315 - DUF4831 family protein, at 148,049 to 149,116 _RS15315 HMPREF1078_RS15320: HMPREF1078_RS15320 - tetratricopeptide repeat protein, at 149,411 to 150,946 _RS15320 HMPREF1078_RS15325: HMPREF1078_RS15325 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 151,698 to 153,209 _RS15325 HMPREF1078_RS15330: HMPREF1078_RS15330 - tRNA-Gly, at 153,391 to 153,463 _RS15330 HMPREF1078_RS15335: HMPREF1078_RS15335 - acetylglutamate kinase, at 153,541 to 154,308 _RS15335 HMPREF1078_RS15340: HMPREF1078_RS15340 - ATP-binding cassette domain-containing protein, at 154,571 to 156,040 _RS15340 HMPREF1078_RS15345: HMPREF1078_RS15345 - DUF6057 family protein, at 156,052 to 157,803 _RS15345 HMPREF1078_RS15350: HMPREF1078_RS15350 - PD40 domain-containing protein, at 157,815 to 159,278 _RS15350 HMPREF1078_RS15355: HMPREF1078_RS15355 - hypothetical protein, at 159,367 to 160,239 _RS15355 HMPREF1078_RS15360: HMPREF1078_RS15360 - RagB/SusD family nutrient uptake outer membrane protein, at 160,269 to 161,807 _RS15360 HMPREF1078_RS15365: HMPREF1078_RS15365 - TonB-dependent receptor, at 161,837 to 164,758 _RS15365
Locus Name Description Strand Phenotype
HMPREF1078_RS15315 HMPREF1078_RS15315 DUF4831 family protein - strong
HMPREF1078_RS15320 HMPREF1078_RS15320 tetratricopeptide repeat protein - cofit
HMPREF1078_RS15325 HMPREF1078_RS15325 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase - strong
HMPREF1078_RS15330 HMPREF1078_RS15330 tRNA-Gly - no data
HMPREF1078_RS15335 HMPREF1078_RS15335 acetylglutamate kinase + strong
HMPREF1078_RS15340 HMPREF1078_RS15340 ATP-binding cassette domain-containing protein + insig.
HMPREF1078_RS15345 HMPREF1078_RS15345 DUF6057 family protein + cofit
HMPREF1078_RS15350 HMPREF1078_RS15350 PD40 domain-containing protein + insig.
HMPREF1078_RS15355 HMPREF1078_RS15355 hypothetical protein - sig.
HMPREF1078_RS15360 HMPREF1078_RS15360 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1078_RS15365 HMPREF1078_RS15365 TonB-dependent receptor - cofit

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