Gene info for HMPREF1078_RS15260 in Parabacteroides merdae CL09T00C40

Annotation: M23 family metallopeptidase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 136,874 to 137,746
See nucleotide sequence around HMPREF1078_RS15260 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15235 and HMPREF1078_RS15240 are separated by 4 nucleotidesHMPREF1078_RS15240 and HMPREF1078_RS15245 are separated by 598 nucleotidesHMPREF1078_RS15245 and HMPREF1078_RS15250 overlap by 4 nucleotidesHMPREF1078_RS15250 and HMPREF1078_RS15255 are separated by 11 nucleotidesHMPREF1078_RS15255 and HMPREF1078_RS15260 are separated by 15 nucleotidesHMPREF1078_RS15260 and HMPREF1078_RS15265 are separated by 5 nucleotidesHMPREF1078_RS15265 and HMPREF1078_RS15270 are separated by 140 nucleotidesHMPREF1078_RS15270 and HMPREF1078_RS15275 are separated by 144 nucleotidesHMPREF1078_RS15275 and HMPREF1078_RS15280 are separated by 8 nucleotidesHMPREF1078_RS15280 and HMPREF1078_RS15285 overlap by 13 nucleotides HMPREF1078_RS15235: HMPREF1078_RS15235 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 130,154 to 131,965 _RS15235 HMPREF1078_RS15240: HMPREF1078_RS15240 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 131,970 to 133,823 _RS15240 HMPREF1078_RS15245: HMPREF1078_RS15245 - DUF4290 domain-containing protein, at 134,422 to 135,024 _RS15245 HMPREF1078_RS15250: HMPREF1078_RS15250 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 135,021 to 136,325 _RS15250 HMPREF1078_RS15255: HMPREF1078_RS15255 - ribosome maturation factor RimM, at 136,337 to 136,858 _RS15255 HMPREF1078_RS15260: HMPREF1078_RS15260 - M23 family metallopeptidase, at 136,874 to 137,746 _RS15260 HMPREF1078_RS15265: HMPREF1078_RS15265 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 137,752 to 138,903 _RS15265 HMPREF1078_RS15270: HMPREF1078_RS15270 - RIP metalloprotease RseP, at 139,044 to 140,378 _RS15270 HMPREF1078_RS15275: HMPREF1078_RS15275 - dethiobiotin synthase, at 140,523 to 141,200 _RS15275 HMPREF1078_RS15280: HMPREF1078_RS15280 - malonyl-ACP O-methyltransferase BioC, at 141,209 to 141,973 _RS15280 HMPREF1078_RS15285: HMPREF1078_RS15285 - DUF452 family protein, at 141,961 to 142,626 _RS15285
Locus Name Description Strand Phenotype
HMPREF1078_RS15235 HMPREF1078_RS15235 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15240 HMPREF1078_RS15240 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15245 HMPREF1078_RS15245 DUF4290 domain-containing protein + sig.
HMPREF1078_RS15250 HMPREF1078_RS15250 UDP-N-acetylglucosamine 1-carboxyvinyltransferase + no data
HMPREF1078_RS15255 HMPREF1078_RS15255 ribosome maturation factor RimM + strong
HMPREF1078_RS15260 HMPREF1078_RS15260 M23 family metallopeptidase + strong
HMPREF1078_RS15265 HMPREF1078_RS15265 1-deoxy-D-xylulose-5-phosphate reductoisomerase + no data
HMPREF1078_RS15270 HMPREF1078_RS15270 RIP metalloprotease RseP + strong
HMPREF1078_RS15275 HMPREF1078_RS15275 dethiobiotin synthase - strong
HMPREF1078_RS15280 HMPREF1078_RS15280 malonyl-ACP O-methyltransferase BioC - strong
HMPREF1078_RS15285 HMPREF1078_RS15285 DUF452 family protein - strong

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