Gene info for HMPREF1078_RS15240 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 2 TIM barrel-domain containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 131,970 to 133,823
See nucleotide sequence around HMPREF1078_RS15240 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15215 and HMPREF1078_RS15220 are separated by 6 nucleotidesHMPREF1078_RS15220 and HMPREF1078_RS15225 are separated by 16 nucleotidesHMPREF1078_RS15225 and HMPREF1078_RS15230 are separated by 200 nucleotidesHMPREF1078_RS15230 and HMPREF1078_RS15235 are separated by 36 nucleotidesHMPREF1078_RS15235 and HMPREF1078_RS15240 are separated by 4 nucleotidesHMPREF1078_RS15240 and HMPREF1078_RS15245 are separated by 598 nucleotidesHMPREF1078_RS15245 and HMPREF1078_RS15250 overlap by 4 nucleotidesHMPREF1078_RS15250 and HMPREF1078_RS15255 are separated by 11 nucleotidesHMPREF1078_RS15255 and HMPREF1078_RS15260 are separated by 15 nucleotidesHMPREF1078_RS15260 and HMPREF1078_RS15265 are separated by 5 nucleotides HMPREF1078_RS15215: HMPREF1078_RS15215 - TonB-dependent receptor, at 121,001 to 124,429 _RS15215 HMPREF1078_RS15220: HMPREF1078_RS15220 - RagB/SusD family nutrient uptake outer membrane protein, at 124,436 to 126,268 _RS15220 HMPREF1078_RS15225: HMPREF1078_RS15225 - DUF3823 domain-containing protein, at 126,285 to 126,959 _RS15225 HMPREF1078_RS15230: HMPREF1078_RS15230 - family 43 glycosylhydrolase, at 127,160 to 130,117 _RS15230 HMPREF1078_RS15235: HMPREF1078_RS15235 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 130,154 to 131,965 _RS15235 HMPREF1078_RS15240: HMPREF1078_RS15240 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 131,970 to 133,823 _RS15240 HMPREF1078_RS15245: HMPREF1078_RS15245 - DUF4290 domain-containing protein, at 134,422 to 135,024 _RS15245 HMPREF1078_RS15250: HMPREF1078_RS15250 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 135,021 to 136,325 _RS15250 HMPREF1078_RS15255: HMPREF1078_RS15255 - ribosome maturation factor RimM, at 136,337 to 136,858 _RS15255 HMPREF1078_RS15260: HMPREF1078_RS15260 - M23 family metallopeptidase, at 136,874 to 137,746 _RS15260 HMPREF1078_RS15265: HMPREF1078_RS15265 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 137,752 to 138,903 _RS15265
Locus Name Description Strand Phenotype
HMPREF1078_RS15215 HMPREF1078_RS15215 TonB-dependent receptor + insig.
HMPREF1078_RS15220 HMPREF1078_RS15220 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS15225 HMPREF1078_RS15225 DUF3823 domain-containing protein + insig.
HMPREF1078_RS15230 HMPREF1078_RS15230 family 43 glycosylhydrolase + insig.
HMPREF1078_RS15235 HMPREF1078_RS15235 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15240 HMPREF1078_RS15240 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15245 HMPREF1078_RS15245 DUF4290 domain-containing protein + insig.
HMPREF1078_RS15250 HMPREF1078_RS15250 UDP-N-acetylglucosamine 1-carboxyvinyltransferase + no data
HMPREF1078_RS15255 HMPREF1078_RS15255 ribosome maturation factor RimM + strong
HMPREF1078_RS15260 HMPREF1078_RS15260 M23 family metallopeptidase + strong
HMPREF1078_RS15265 HMPREF1078_RS15265 1-deoxy-D-xylulose-5-phosphate reductoisomerase + no data

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