Gene info for HMPREF1078_RS15230 in Parabacteroides merdae CL09T00C40

Annotation: family 43 glycosylhydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 127,160 to 130,117
See nucleotide sequence around HMPREF1078_RS15230 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15205 and HMPREF1078_RS15210 are separated by 124 nucleotidesHMPREF1078_RS15210 and HMPREF1078_RS15215 are separated by 96 nucleotidesHMPREF1078_RS15215 and HMPREF1078_RS15220 are separated by 6 nucleotidesHMPREF1078_RS15220 and HMPREF1078_RS15225 are separated by 16 nucleotidesHMPREF1078_RS15225 and HMPREF1078_RS15230 are separated by 200 nucleotidesHMPREF1078_RS15230 and HMPREF1078_RS15235 are separated by 36 nucleotidesHMPREF1078_RS15235 and HMPREF1078_RS15240 are separated by 4 nucleotidesHMPREF1078_RS15240 and HMPREF1078_RS15245 are separated by 598 nucleotidesHMPREF1078_RS15245 and HMPREF1078_RS15250 overlap by 4 nucleotidesHMPREF1078_RS15250 and HMPREF1078_RS15255 are separated by 11 nucleotides HMPREF1078_RS15205: HMPREF1078_RS15205 - PD40 domain-containing protein, at 118,330 to 119,784 _RS15205 HMPREF1078_RS15210: HMPREF1078_RS15210 - FecR family protein, at 119,909 to 120,904 _RS15210 HMPREF1078_RS15215: HMPREF1078_RS15215 - TonB-dependent receptor, at 121,001 to 124,429 _RS15215 HMPREF1078_RS15220: HMPREF1078_RS15220 - RagB/SusD family nutrient uptake outer membrane protein, at 124,436 to 126,268 _RS15220 HMPREF1078_RS15225: HMPREF1078_RS15225 - DUF3823 domain-containing protein, at 126,285 to 126,959 _RS15225 HMPREF1078_RS15230: HMPREF1078_RS15230 - family 43 glycosylhydrolase, at 127,160 to 130,117 _RS15230 HMPREF1078_RS15235: HMPREF1078_RS15235 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 130,154 to 131,965 _RS15235 HMPREF1078_RS15240: HMPREF1078_RS15240 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 131,970 to 133,823 _RS15240 HMPREF1078_RS15245: HMPREF1078_RS15245 - DUF4290 domain-containing protein, at 134,422 to 135,024 _RS15245 HMPREF1078_RS15250: HMPREF1078_RS15250 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 135,021 to 136,325 _RS15250 HMPREF1078_RS15255: HMPREF1078_RS15255 - ribosome maturation factor RimM, at 136,337 to 136,858 _RS15255
Locus Name Description Strand Phenotype
HMPREF1078_RS15205 HMPREF1078_RS15205 PD40 domain-containing protein + insig.
HMPREF1078_RS15210 HMPREF1078_RS15210 FecR family protein + insig.
HMPREF1078_RS15215 HMPREF1078_RS15215 TonB-dependent receptor + insig.
HMPREF1078_RS15220 HMPREF1078_RS15220 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS15225 HMPREF1078_RS15225 DUF3823 domain-containing protein + insig.
HMPREF1078_RS15230 HMPREF1078_RS15230 family 43 glycosylhydrolase + cofit
HMPREF1078_RS15235 HMPREF1078_RS15235 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15240 HMPREF1078_RS15240 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS15245 HMPREF1078_RS15245 DUF4290 domain-containing protein + sig.
HMPREF1078_RS15250 HMPREF1078_RS15250 UDP-N-acetylglucosamine 1-carboxyvinyltransferase + no data
HMPREF1078_RS15255 HMPREF1078_RS15255 ribosome maturation factor RimM + strong

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