Gene info for HMPREF1078_RS15110 in Parabacteroides merdae CL09T00C40

Annotation: electron transfer flavoprotein subunit beta/FixA family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, - strand, nucleotides 87,082 to 87,987
See nucleotide sequence around HMPREF1078_RS15110 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15080 and HMPREF1078_RS15085 overlap by 4 nucleotidesHMPREF1078_RS15085 and HMPREF1078_RS15090 are separated by 2840 nucleotidesHMPREF1078_RS15090 and HMPREF1078_RS15100 are separated by 527 nucleotidesHMPREF1078_RS15100 and HMPREF1078_RS15105 are separated by 4 nucleotidesHMPREF1078_RS15105 and HMPREF1078_RS15110 are separated by 48 nucleotidesHMPREF1078_RS15110 and HMPREF1078_RS15115 are separated by 326 nucleotidesHMPREF1078_RS15115 and HMPREF1078_RS15120 are separated by 43 nucleotidesHMPREF1078_RS15120 and HMPREF1078_RS15125 overlap by 4 nucleotidesHMPREF1078_RS15125 and HMPREF1078_RS15130 are separated by 102 nucleotidesHMPREF1078_RS15130 and HMPREF1078_RS15135 are separated by 452 nucleotides HMPREF1078_RS15080: HMPREF1078_RS15080 - type I-C CRISPR-associated protein Cas8c/Csd1, at 77,208 to 78,962 _RS15080 HMPREF1078_RS15085: HMPREF1078_RS15085 - type I-C CRISPR-associated protein Cas5c, at 78,959 to 79,639 _RS15085 HMPREF1078_RS15090: HMPREF1078_RS15090 - MATE family efflux transporter, at 82,480 to 83,775 _RS15090 HMPREF1078_RS15100: HMPREF1078_RS15100 - Acyl-CoA dehydrogenase C-terminal domain-containing protein, at 84,303 to 86,009 _RS15100 HMPREF1078_RS15105: HMPREF1078_RS15105 - electron transfer flavoprotein subunit alpha/FixB family protein, at 86,014 to 87,033 _RS15105 HMPREF1078_RS15110: HMPREF1078_RS15110 - electron transfer flavoprotein subunit beta/FixA family protein, at 87,082 to 87,987 _RS15110 HMPREF1078_RS15115: HMPREF1078_RS15115 - aminomethyl-transferring glycine dehydrogenase, at 88,314 to 91,166 _RS15115 HMPREF1078_RS15120: HMPREF1078_RS15120 - MBL fold metallo-hydrolase, at 91,210 to 91,848 _RS15120 HMPREF1078_RS15125: HMPREF1078_RS15125 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 91,845 to 92,465 _RS15125 HMPREF1078_RS15130: HMPREF1078_RS15130 - DUF3298 and DUF4163 domain-containing protein, at 92,568 to 93,419 _RS15130 HMPREF1078_RS15135: HMPREF1078_RS15135 - FAD:protein FMN transferase, at 93,872 to 94,678 _RS15135
Locus Name Description Strand Phenotype
HMPREF1078_RS15080 HMPREF1078_RS15080 type I-C CRISPR-associated protein Cas8c/Csd1 - insig.
HMPREF1078_RS15085 HMPREF1078_RS15085 type I-C CRISPR-associated protein Cas5c - insig.
HMPREF1078_RS15090 HMPREF1078_RS15090 MATE family efflux transporter + insig.
HMPREF1078_RS15100 HMPREF1078_RS15100 Acyl-CoA dehydrogenase C-terminal domain-containing protein - no data
HMPREF1078_RS15105 HMPREF1078_RS15105 electron transfer flavoprotein subunit alpha/FixB family protein - insig.
HMPREF1078_RS15110 HMPREF1078_RS15110 electron transfer flavoprotein subunit beta/FixA family protein - insig.
HMPREF1078_RS15115 HMPREF1078_RS15115 aminomethyl-transferring glycine dehydrogenase - cofit
HMPREF1078_RS15120 HMPREF1078_RS15120 MBL fold metallo-hydrolase - insig.
HMPREF1078_RS15125 HMPREF1078_RS15125 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG - insig.
HMPREF1078_RS15130 HMPREF1078_RS15130 DUF3298 and DUF4163 domain-containing protein - strong
HMPREF1078_RS15135 HMPREF1078_RS15135 FAD:protein FMN transferase + insig.

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