Gene info for HMPREF1078_RS15090 in Parabacteroides merdae CL09T00C40

Annotation: MATE family efflux transporter
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 82,480 to 83,775
See nucleotide sequence around HMPREF1078_RS15090 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15065 and HMPREF1078_RS15070 are separated by 3 nucleotidesHMPREF1078_RS15070 and HMPREF1078_RS15075 overlap by 4 nucleotidesHMPREF1078_RS15075 and HMPREF1078_RS15080 are separated by 12 nucleotidesHMPREF1078_RS15080 and HMPREF1078_RS15085 overlap by 4 nucleotidesHMPREF1078_RS15085 and HMPREF1078_RS15090 are separated by 2840 nucleotidesHMPREF1078_RS15090 and HMPREF1078_RS15100 are separated by 527 nucleotidesHMPREF1078_RS15100 and HMPREF1078_RS15105 are separated by 4 nucleotidesHMPREF1078_RS15105 and HMPREF1078_RS15110 are separated by 48 nucleotidesHMPREF1078_RS15110 and HMPREF1078_RS15115 are separated by 326 nucleotidesHMPREF1078_RS15115 and HMPREF1078_RS15120 are separated by 43 nucleotides HMPREF1078_RS15065: HMPREF1078_RS15065 - type I-C CRISPR-associated endonuclease Cas1c, at 74,626 to 75,660 _RS15065 HMPREF1078_RS15070: HMPREF1078_RS15070 - CRISPR-associated protein Cas4, at 75,664 to 76,332 _RS15070 HMPREF1078_RS15075: HMPREF1078_RS15075 - type I-C CRISPR-associated protein Cas7/Csd2, at 76,329 to 77,195 _RS15075 HMPREF1078_RS15080: HMPREF1078_RS15080 - type I-C CRISPR-associated protein Cas8c/Csd1, at 77,208 to 78,962 _RS15080 HMPREF1078_RS15085: HMPREF1078_RS15085 - type I-C CRISPR-associated protein Cas5c, at 78,959 to 79,639 _RS15085 HMPREF1078_RS15090: HMPREF1078_RS15090 - MATE family efflux transporter, at 82,480 to 83,775 _RS15090 HMPREF1078_RS15100: HMPREF1078_RS15100 - Acyl-CoA dehydrogenase C-terminal domain-containing protein, at 84,303 to 86,009 _RS15100 HMPREF1078_RS15105: HMPREF1078_RS15105 - electron transfer flavoprotein subunit alpha/FixB family protein, at 86,014 to 87,033 _RS15105 HMPREF1078_RS15110: HMPREF1078_RS15110 - electron transfer flavoprotein subunit beta/FixA family protein, at 87,082 to 87,987 _RS15110 HMPREF1078_RS15115: HMPREF1078_RS15115 - aminomethyl-transferring glycine dehydrogenase, at 88,314 to 91,166 _RS15115 HMPREF1078_RS15120: HMPREF1078_RS15120 - MBL fold metallo-hydrolase, at 91,210 to 91,848 _RS15120
Locus Name Description Strand Phenotype
HMPREF1078_RS15065 HMPREF1078_RS15065 type I-C CRISPR-associated endonuclease Cas1c - insig.
HMPREF1078_RS15070 HMPREF1078_RS15070 CRISPR-associated protein Cas4 - insig.
HMPREF1078_RS15075 HMPREF1078_RS15075 type I-C CRISPR-associated protein Cas7/Csd2 - insig.
HMPREF1078_RS15080 HMPREF1078_RS15080 type I-C CRISPR-associated protein Cas8c/Csd1 - insig.
HMPREF1078_RS15085 HMPREF1078_RS15085 type I-C CRISPR-associated protein Cas5c - insig.
HMPREF1078_RS15090 HMPREF1078_RS15090 MATE family efflux transporter + insig.
HMPREF1078_RS15100 HMPREF1078_RS15100 Acyl-CoA dehydrogenase C-terminal domain-containing protein - no data
HMPREF1078_RS15105 HMPREF1078_RS15105 electron transfer flavoprotein subunit alpha/FixB family protein - insig.
HMPREF1078_RS15110 HMPREF1078_RS15110 electron transfer flavoprotein subunit beta/FixA family protein - no data
HMPREF1078_RS15115 HMPREF1078_RS15115 aminomethyl-transferring glycine dehydrogenase - cofit
HMPREF1078_RS15120 HMPREF1078_RS15120 MBL fold metallo-hydrolase - insig.

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