Gene info for HMPREF1078_RS15045 in Parabacteroides merdae CL09T00C40

Annotation: HU family DNA-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 66,552 to 66,938
See nucleotide sequence around HMPREF1078_RS15045 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS15020 and HMPREF1078_RS15025 are separated by 160 nucleotidesHMPREF1078_RS15025 and HMPREF1078_RS15030 are separated by 269 nucleotidesHMPREF1078_RS15030 and HMPREF1078_RS15035 overlap by 32 nucleotidesHMPREF1078_RS15035 and HMPREF1078_RS15040 are separated by 152 nucleotidesHMPREF1078_RS15040 and HMPREF1078_RS15045 are separated by 300 nucleotidesHMPREF1078_RS15045 and HMPREF1078_RS15050 are separated by 158 nucleotidesHMPREF1078_RS15050 and HMPREF1078_RS15055 are separated by 127 nucleotidesHMPREF1078_RS15055 and HMPREF1078_RS18915 are separated by 2805 nucleotidesHMPREF1078_RS18915 and HMPREF1078_RS15065 are separated by 4 nucleotidesHMPREF1078_RS15065 and HMPREF1078_RS15070 are separated by 3 nucleotides HMPREF1078_RS15020: HMPREF1078_RS15020 - DNA recombination protein RmuC, at 59,568 to 60,842 _RS15020 HMPREF1078_RS15025: HMPREF1078_RS15025 - thiol peroxidase, at 61,003 to 61,506 _RS15025 HMPREF1078_RS15030: HMPREF1078_RS15030 - response regulator transcription factor, at 61,776 to 62,468 _RS15030 HMPREF1078_RS15035: HMPREF1078_RS15035 - HAMP domain-containing sensor histidine kinase, at 62,437 to 63,954 _RS15035 HMPREF1078_RS15040: HMPREF1078_RS15040 - outer membrane beta-barrel family protein, at 64,107 to 66,251 _RS15040 HMPREF1078_RS15045: HMPREF1078_RS15045 - HU family DNA-binding protein, at 66,552 to 66,938 _RS15045 HMPREF1078_RS15050: HMPREF1078_RS15050 - VapE family protein, at 67,097 to 69,172 _RS15050 HMPREF1078_RS15055: HMPREF1078_RS15055 - CRISPR-associated helicase/endonuclease Cas3, at 69,300 to 71,525 _RS15055 HMPREF1078_RS18915: HMPREF1078_RS18915 - CRISPR-associated endonuclease Cas2, at 74,331 to 74,621 _RS18915 HMPREF1078_RS15065: HMPREF1078_RS15065 - type I-C CRISPR-associated endonuclease Cas1c, at 74,626 to 75,660 _RS15065 HMPREF1078_RS15070: HMPREF1078_RS15070 - CRISPR-associated protein Cas4, at 75,664 to 76,332 _RS15070
Locus Name Description Strand Phenotype
HMPREF1078_RS15020 HMPREF1078_RS15020 DNA recombination protein RmuC - insig.
HMPREF1078_RS15025 HMPREF1078_RS15025 thiol peroxidase + insig.
HMPREF1078_RS15030 HMPREF1078_RS15030 response regulator transcription factor - insig.
HMPREF1078_RS15035 HMPREF1078_RS15035 HAMP domain-containing sensor histidine kinase - insig.
HMPREF1078_RS15040 HMPREF1078_RS15040 outer membrane beta-barrel family protein + insig.
HMPREF1078_RS15045 HMPREF1078_RS15045 HU family DNA-binding protein + insig.
HMPREF1078_RS15050 HMPREF1078_RS15050 VapE family protein + insig.
HMPREF1078_RS15055 HMPREF1078_RS15055 CRISPR-associated helicase/endonuclease Cas3 + insig.
HMPREF1078_RS18915 HMPREF1078_RS18915 CRISPR-associated endonuclease Cas2 - insig.
HMPREF1078_RS15065 HMPREF1078_RS15065 type I-C CRISPR-associated endonuclease Cas1c - insig.
HMPREF1078_RS15070 HMPREF1078_RS15070 CRISPR-associated protein Cas4 - insig.

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