Gene info for HMPREF1078_RS15005 in Parabacteroides merdae CL09T00C40

Annotation: biosynthetic arginine decarboxylase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 55,014 to 56,906
See nucleotide sequence around HMPREF1078_RS15005 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14980 and HMPREF1078_RS14985 are separated by 8 nucleotidesHMPREF1078_RS14985 and HMPREF1078_RS14990 overlap by 81 nucleotidesHMPREF1078_RS14990 and HMPREF1078_RS14995 are separated by 141 nucleotidesHMPREF1078_RS14995 and HMPREF1078_RS15000 are separated by 110 nucleotidesHMPREF1078_RS15000 and HMPREF1078_RS15005 are separated by 401 nucleotidesHMPREF1078_RS15005 and HMPREF1078_RS15010 overlap by 13 nucleotidesHMPREF1078_RS15010 and HMPREF1078_RS15015 overlap by 1 nucleotidesHMPREF1078_RS15015 and HMPREF1078_RS15020 overlap by 4 nucleotidesHMPREF1078_RS15020 and HMPREF1078_RS15025 are separated by 160 nucleotidesHMPREF1078_RS15025 and HMPREF1078_RS15030 are separated by 269 nucleotides HMPREF1078_RS14980: HMPREF1078_RS14980 - DUF4296 domain-containing protein, at 49,996 to 50,805 _RS14980 HMPREF1078_RS14985: HMPREF1078_RS14985 - hypothetical protein, at 50,814 to 51,248 _RS14985 HMPREF1078_RS14990: HMPREF1078_RS14990 - RNA methyltransferase, at 51,168 to 51,938 _RS14990 HMPREF1078_RS14995: HMPREF1078_RS14995 - BamA/TamA family outer membrane protein, at 52,080 to 54,428 _RS14995 HMPREF1078_RS15000: HMPREF1078_RS15000 - tRNA-Arg, at 54,539 to 54,612 _RS15000 HMPREF1078_RS15005: HMPREF1078_RS15005 - biosynthetic arginine decarboxylase, at 55,014 to 56,906 _RS15005 HMPREF1078_RS15010: HMPREF1078_RS15010 - DNA polymerase IV, at 56,894 to 57,988 _RS15010 HMPREF1078_RS15015: HMPREF1078_RS15015 - AbgT family transporter, at 57,988 to 59,571 _RS15015 HMPREF1078_RS15020: HMPREF1078_RS15020 - DNA recombination protein RmuC, at 59,568 to 60,842 _RS15020 HMPREF1078_RS15025: HMPREF1078_RS15025 - thiol peroxidase, at 61,003 to 61,506 _RS15025 HMPREF1078_RS15030: HMPREF1078_RS15030 - response regulator transcription factor, at 61,776 to 62,468 _RS15030
Locus Name Description Strand Phenotype
HMPREF1078_RS14980 HMPREF1078_RS14980 DUF4296 domain-containing protein + insig.
HMPREF1078_RS14985 HMPREF1078_RS14985 hypothetical protein + insig.
HMPREF1078_RS14990 HMPREF1078_RS14990 RNA methyltransferase - insig.
HMPREF1078_RS14995 HMPREF1078_RS14995 BamA/TamA family outer membrane protein + strong
HMPREF1078_RS15000 HMPREF1078_RS15000 tRNA-Arg + no data
HMPREF1078_RS15005 HMPREF1078_RS15005 biosynthetic arginine decarboxylase + strong
HMPREF1078_RS15010 HMPREF1078_RS15010 DNA polymerase IV - insig.
HMPREF1078_RS15015 HMPREF1078_RS15015 AbgT family transporter - insig.
HMPREF1078_RS15020 HMPREF1078_RS15020 DNA recombination protein RmuC - insig.
HMPREF1078_RS15025 HMPREF1078_RS15025 thiol peroxidase + insig.
HMPREF1078_RS15030 HMPREF1078_RS15030 response regulator transcription factor - insig.

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