Gene info for HMPREF1078_RS14980 in Parabacteroides merdae CL09T00C40

Annotation: DUF4296 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 49,996 to 50,805
See nucleotide sequence around HMPREF1078_RS14980 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14955 and HMPREF1078_RS14960 overlap by 4 nucleotidesHMPREF1078_RS14960 and HMPREF1078_RS14965 are separated by 85 nucleotidesHMPREF1078_RS14965 and HMPREF1078_RS14970 are separated by 140 nucleotidesHMPREF1078_RS14970 and HMPREF1078_RS14975 are separated by 0 nucleotidesHMPREF1078_RS14975 and HMPREF1078_RS14980 are separated by 8 nucleotidesHMPREF1078_RS14980 and HMPREF1078_RS14985 are separated by 8 nucleotidesHMPREF1078_RS14985 and HMPREF1078_RS14990 overlap by 81 nucleotidesHMPREF1078_RS14990 and HMPREF1078_RS14995 are separated by 141 nucleotidesHMPREF1078_RS14995 and HMPREF1078_RS15000 are separated by 110 nucleotidesHMPREF1078_RS15000 and HMPREF1078_RS15005 are separated by 401 nucleotides HMPREF1078_RS14955: HMPREF1078_RS14955 - methionine synthase, at 40,611 to 44,306 _RS14955 HMPREF1078_RS14960: HMPREF1078_RS14960 - DUF3810 domain-containing protein, at 44,303 to 45,340 _RS14960 HMPREF1078_RS14965: HMPREF1078_RS14965 - isoleucine--tRNA ligase, at 45,426 to 48,851 _RS14965 HMPREF1078_RS14970: HMPREF1078_RS14970 - TraR/DksA C4-type zinc finger protein, at 48,992 to 49,372 _RS14970 HMPREF1078_RS14975: HMPREF1078_RS14975 - lipoprotein signal peptidase, at 49,373 to 49,987 _RS14975 HMPREF1078_RS14980: HMPREF1078_RS14980 - DUF4296 domain-containing protein, at 49,996 to 50,805 _RS14980 HMPREF1078_RS14985: HMPREF1078_RS14985 - hypothetical protein, at 50,814 to 51,248 _RS14985 HMPREF1078_RS14990: HMPREF1078_RS14990 - RNA methyltransferase, at 51,168 to 51,938 _RS14990 HMPREF1078_RS14995: HMPREF1078_RS14995 - BamA/TamA family outer membrane protein, at 52,080 to 54,428 _RS14995 HMPREF1078_RS15000: HMPREF1078_RS15000 - tRNA-Arg, at 54,539 to 54,612 _RS15000 HMPREF1078_RS15005: HMPREF1078_RS15005 - biosynthetic arginine decarboxylase, at 55,014 to 56,906 _RS15005
Locus Name Description Strand Phenotype
HMPREF1078_RS14955 HMPREF1078_RS14955 methionine synthase + insig.
HMPREF1078_RS14960 HMPREF1078_RS14960 DUF3810 domain-containing protein + cofit
HMPREF1078_RS14965 HMPREF1078_RS14965 isoleucine--tRNA ligase + no data
HMPREF1078_RS14970 HMPREF1078_RS14970 TraR/DksA C4-type zinc finger protein + no data
HMPREF1078_RS14975 HMPREF1078_RS14975 lipoprotein signal peptidase + no data
HMPREF1078_RS14980 HMPREF1078_RS14980 DUF4296 domain-containing protein + insig.
HMPREF1078_RS14985 HMPREF1078_RS14985 hypothetical protein + insig.
HMPREF1078_RS14990 HMPREF1078_RS14990 RNA methyltransferase - insig.
HMPREF1078_RS14995 HMPREF1078_RS14995 BamA/TamA family outer membrane protein + strong
HMPREF1078_RS15000 HMPREF1078_RS15000 tRNA-Arg + no data
HMPREF1078_RS15005 HMPREF1078_RS15005 biosynthetic arginine decarboxylase + strong

Or browse nearby genes

Or see the comparative fitness browser