Gene info for HMPREF1078_RS14965 in Parabacteroides merdae CL09T00C40

Annotation: isoleucine--tRNA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976529, + strand, nucleotides 45,426 to 48,851
See nucleotide sequence around HMPREF1078_RS14965 or for all of scaffold NZ_JH976529

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14940 and HMPREF1078_RS14945 are separated by 31 nucleotidesHMPREF1078_RS14945 and HMPREF1078_RS14950 are separated by 12 nucleotidesHMPREF1078_RS14950 and HMPREF1078_RS14955 are separated by 9 nucleotidesHMPREF1078_RS14955 and HMPREF1078_RS14960 overlap by 4 nucleotidesHMPREF1078_RS14960 and HMPREF1078_RS14965 are separated by 85 nucleotidesHMPREF1078_RS14965 and HMPREF1078_RS14970 are separated by 140 nucleotidesHMPREF1078_RS14970 and HMPREF1078_RS14975 are separated by 0 nucleotidesHMPREF1078_RS14975 and HMPREF1078_RS14980 are separated by 8 nucleotidesHMPREF1078_RS14980 and HMPREF1078_RS14985 are separated by 8 nucleotidesHMPREF1078_RS14985 and HMPREF1078_RS14990 overlap by 81 nucleotides HMPREF1078_RS14940: HMPREF1078_RS14940 - hypothetical protein, at 38,774 to 39,529 _RS14940 HMPREF1078_RS14945: HMPREF1078_RS14945 - DUF1282 family protein, at 39,561 to 40,127 _RS14945 HMPREF1078_RS14950: HMPREF1078_RS14950 - SsrA-binding protein, at 40,140 to 40,601 _RS14950 HMPREF1078_RS14955: HMPREF1078_RS14955 - methionine synthase, at 40,611 to 44,306 _RS14955 HMPREF1078_RS14960: HMPREF1078_RS14960 - DUF3810 domain-containing protein, at 44,303 to 45,340 _RS14960 HMPREF1078_RS14965: HMPREF1078_RS14965 - isoleucine--tRNA ligase, at 45,426 to 48,851 _RS14965 HMPREF1078_RS14970: HMPREF1078_RS14970 - TraR/DksA C4-type zinc finger protein, at 48,992 to 49,372 _RS14970 HMPREF1078_RS14975: HMPREF1078_RS14975 - lipoprotein signal peptidase, at 49,373 to 49,987 _RS14975 HMPREF1078_RS14980: HMPREF1078_RS14980 - DUF4296 domain-containing protein, at 49,996 to 50,805 _RS14980 HMPREF1078_RS14985: HMPREF1078_RS14985 - hypothetical protein, at 50,814 to 51,248 _RS14985 HMPREF1078_RS14990: HMPREF1078_RS14990 - RNA methyltransferase, at 51,168 to 51,938 _RS14990
Locus Name Description Strand Phenotype
HMPREF1078_RS14940 HMPREF1078_RS14940 hypothetical protein + sig.
HMPREF1078_RS14945 HMPREF1078_RS14945 DUF1282 family protein + strong
HMPREF1078_RS14950 HMPREF1078_RS14950 SsrA-binding protein + insig.
HMPREF1078_RS14955 HMPREF1078_RS14955 methionine synthase + insig.
HMPREF1078_RS14960 HMPREF1078_RS14960 DUF3810 domain-containing protein + cofit
HMPREF1078_RS14965 HMPREF1078_RS14965 isoleucine--tRNA ligase + no data
HMPREF1078_RS14970 HMPREF1078_RS14970 TraR/DksA C4-type zinc finger protein + no data
HMPREF1078_RS14975 HMPREF1078_RS14975 lipoprotein signal peptidase + no data
HMPREF1078_RS14980 HMPREF1078_RS14980 DUF4296 domain-containing protein + insig.
HMPREF1078_RS14985 HMPREF1078_RS14985 hypothetical protein + insig.
HMPREF1078_RS14990 HMPREF1078_RS14990 RNA methyltransferase - insig.

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