Gene info for HMPREF1078_RS14495 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 2 TIM barrel-domain containing protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 394,180 to 398,201
See nucleotide sequence around HMPREF1078_RS14495 or for all of scaffold NZ_JH976528

Nearby Genes

500 ntHMPREF1078_RS14470 and HMPREF1078_RS14475 are separated by 136 nucleotidesHMPREF1078_RS14475 and HMPREF1078_RS14480 are separated by 145 nucleotidesHMPREF1078_RS14480 and HMPREF1078_RS14485 are separated by 102 nucleotidesHMPREF1078_RS14485 and HMPREF1078_RS14490 overlap by 28 nucleotidesHMPREF1078_RS14490 and HMPREF1078_RS14495 are separated by 761 nucleotidesHMPREF1078_RS14495 and HMPREF1078_RS14500 are separated by 75 nucleotidesHMPREF1078_RS14500 and HMPREF1078_RS14505 overlap by 14 nucleotidesHMPREF1078_RS14505 and HMPREF1078_RS14510 are separated by 29 nucleotidesHMPREF1078_RS14510 and HMPREF1078_RS14515 are separated by 2 nucleotidesHMPREF1078_RS14515 and HMPREF1078_RS14520 overlap by 1 nucleotides HMPREF1078_RS14470: HMPREF1078_RS14470 - MBL fold metallo-hydrolase, at 385,321 to 386,139 _RS14470 HMPREF1078_RS14475: HMPREF1078_RS14475 - hypothetical protein, at 386,276 to 387,013 _RS14475 HMPREF1078_RS14480: HMPREF1078_RS14480 - preprotein translocase subunit SecA, at 387,159 to 390,518 _RS14480 HMPREF1078_RS14485: HMPREF1078_RS14485 - alkaline phosphatase family protein, at 390,621 to 392,246 _RS14485 HMPREF1078_RS14490: HMPREF1078_RS14490 - DUF4105 domain-containing protein, at 392,219 to 393,418 _RS14490 HMPREF1078_RS14495: HMPREF1078_RS14495 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 394,180 to 398,201 _RS14495 HMPREF1078_RS14500: HMPREF1078_RS14500 - type III pantothenate kinase, at 398,277 to 399,056 _RS14500 HMPREF1078_RS14505: HMPREF1078_RS14505 - hypothetical protein, at 399,043 to 400,332 _RS14505 HMPREF1078_RS14510: HMPREF1078_RS14510 - tetratricopeptide repeat protein, at 400,362 to 401,726 _RS14510 HMPREF1078_RS14515: HMPREF1078_RS14515 - LPS export ABC transporter periplasmic protein LptC, at 401,729 to 402,469 _RS14515 HMPREF1078_RS14520: HMPREF1078_RS14520 - hemolysin family protein, at 402,469 to 403,725 _RS14520
Locus Name Description Strand Phenotype
HMPREF1078_RS14470 HMPREF1078_RS14470 MBL fold metallo-hydrolase + insig.
HMPREF1078_RS14475 HMPREF1078_RS14475 hypothetical protein - insig.
HMPREF1078_RS14480 HMPREF1078_RS14480 preprotein translocase subunit SecA - no data
HMPREF1078_RS14485 HMPREF1078_RS14485 alkaline phosphatase family protein - insig.
HMPREF1078_RS14490 HMPREF1078_RS14490 DUF4105 domain-containing protein - no data
HMPREF1078_RS14495 HMPREF1078_RS14495 glycoside hydrolase family 2 TIM barrel-domain containing protein + insig.
HMPREF1078_RS14500 HMPREF1078_RS14500 type III pantothenate kinase + cofit
HMPREF1078_RS14505 HMPREF1078_RS14505 hypothetical protein + strong
HMPREF1078_RS14510 HMPREF1078_RS14510 tetratricopeptide repeat protein + no data
HMPREF1078_RS14515 HMPREF1078_RS14515 LPS export ABC transporter periplasmic protein LptC + insig.
HMPREF1078_RS14520 HMPREF1078_RS14520 hemolysin family protein + insig.

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