Gene info for HMPREF1078_RS14310 in Parabacteroides merdae CL09T00C40

Annotation: PD40 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 345,079 to 346,530
See nucleotide sequence around HMPREF1078_RS14310 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14285 and HMPREF1078_RS14290 are separated by 219 nucleotidesHMPREF1078_RS14290 and HMPREF1078_RS14295 are separated by 1200 nucleotidesHMPREF1078_RS14295 and HMPREF1078_RS14300 are separated by 14 nucleotidesHMPREF1078_RS14300 and HMPREF1078_RS14305 are separated by 120 nucleotidesHMPREF1078_RS14305 and HMPREF1078_RS14310 are separated by 3 nucleotidesHMPREF1078_RS14310 and HMPREF1078_RS14315 are separated by 214 nucleotidesHMPREF1078_RS14315 and HMPREF1078_RS14320 are separated by 191 nucleotidesHMPREF1078_RS14320 and HMPREF1078_RS14325 are separated by 40 nucleotidesHMPREF1078_RS14325 and HMPREF1078_RS14330 are separated by 6 nucleotidesHMPREF1078_RS14330 and HMPREF1078_RS14335 are separated by 294 nucleotides HMPREF1078_RS14285: HMPREF1078_RS14285 - IMP dehydrogenase, at 334,787 to 336,280 _RS14285 HMPREF1078_RS14290: HMPREF1078_RS14290 - pirin family protein, at 336,500 to 337,207 _RS14290 HMPREF1078_RS14295: HMPREF1078_RS14295 - SusC/RagA family TonB-linked outer membrane protein, at 338,408 to 341,446 _RS14295 HMPREF1078_RS14300: HMPREF1078_RS14300 - RagB/SusD family nutrient uptake outer membrane protein, at 341,461 to 343,182 _RS14300 HMPREF1078_RS14305: HMPREF1078_RS14305 - DUF6057 family protein, at 343,303 to 345,075 _RS14305 HMPREF1078_RS14310: HMPREF1078_RS14310 - PD40 domain-containing protein, at 345,079 to 346,530 _RS14310 HMPREF1078_RS14315: HMPREF1078_RS14315 - M64 family metallopeptidase, at 346,745 to 348,025 _RS14315 HMPREF1078_RS14320: HMPREF1078_RS14320 - TonB-dependent receptor, at 348,217 to 350,880 _RS14320 HMPREF1078_RS14325: HMPREF1078_RS14325 - hypothetical protein, at 350,921 to 352,300 _RS14325 HMPREF1078_RS14330: HMPREF1078_RS14330 - metallophosphoesterase, at 352,307 to 353,323 _RS14330 HMPREF1078_RS14335: HMPREF1078_RS14335 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 353,618 to 354,844 _RS14335
Locus Name Description Strand Phenotype
HMPREF1078_RS14285 HMPREF1078_RS14285 IMP dehydrogenase - strong
HMPREF1078_RS14290 HMPREF1078_RS14290 pirin family protein + insig.
HMPREF1078_RS14295 HMPREF1078_RS14295 SusC/RagA family TonB-linked outer membrane protein + cofit
HMPREF1078_RS14300 HMPREF1078_RS14300 RagB/SusD family nutrient uptake outer membrane protein + cofit
HMPREF1078_RS14305 HMPREF1078_RS14305 DUF6057 family protein + insig.
HMPREF1078_RS14310 HMPREF1078_RS14310 PD40 domain-containing protein + insig.
HMPREF1078_RS14315 HMPREF1078_RS14315 M64 family metallopeptidase - insig.
HMPREF1078_RS14320 HMPREF1078_RS14320 TonB-dependent receptor + insig.
HMPREF1078_RS14325 HMPREF1078_RS14325 hypothetical protein + insig.
HMPREF1078_RS14330 HMPREF1078_RS14330 metallophosphoesterase + insig.
HMPREF1078_RS14335 HMPREF1078_RS14335 glycine betaine/L-proline ABC transporter ATP-binding protein + sig.

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