Gene info for HMPREF1078_RS14295 in Parabacteroides merdae CL09T00C40

Annotation: SusC/RagA family TonB-linked outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 338,408 to 341,446
See nucleotide sequence around HMPREF1078_RS14295 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14270 and HMPREF1078_RS14275 are separated by 570 nucleotidesHMPREF1078_RS14275 and HMPREF1078_RS14280 overlap by 4 nucleotidesHMPREF1078_RS14280 and HMPREF1078_RS14285 are separated by 85 nucleotidesHMPREF1078_RS14285 and HMPREF1078_RS14290 are separated by 219 nucleotidesHMPREF1078_RS14290 and HMPREF1078_RS14295 are separated by 1200 nucleotidesHMPREF1078_RS14295 and HMPREF1078_RS14300 are separated by 14 nucleotidesHMPREF1078_RS14300 and HMPREF1078_RS14305 are separated by 120 nucleotidesHMPREF1078_RS14305 and HMPREF1078_RS14310 are separated by 3 nucleotidesHMPREF1078_RS14310 and HMPREF1078_RS14315 are separated by 214 nucleotidesHMPREF1078_RS14315 and HMPREF1078_RS14320 are separated by 191 nucleotides HMPREF1078_RS14270: HMPREF1078_RS14270 - glycoside hydrolase family 43 protein, at 329,648 to 330,643 _RS14270 HMPREF1078_RS14275: HMPREF1078_RS14275 - GH116 family glycosyl-hydrolase, at 331,214 to 333,757 _RS14275 HMPREF1078_RS14280: HMPREF1078_RS14280 - alkaline phosphatase family protein, at 333,754 to 334,701 _RS14280 HMPREF1078_RS14285: HMPREF1078_RS14285 - IMP dehydrogenase, at 334,787 to 336,280 _RS14285 HMPREF1078_RS14290: HMPREF1078_RS14290 - pirin family protein, at 336,500 to 337,207 _RS14290 HMPREF1078_RS14295: HMPREF1078_RS14295 - SusC/RagA family TonB-linked outer membrane protein, at 338,408 to 341,446 _RS14295 HMPREF1078_RS14300: HMPREF1078_RS14300 - RagB/SusD family nutrient uptake outer membrane protein, at 341,461 to 343,182 _RS14300 HMPREF1078_RS14305: HMPREF1078_RS14305 - DUF6057 family protein, at 343,303 to 345,075 _RS14305 HMPREF1078_RS14310: HMPREF1078_RS14310 - PD40 domain-containing protein, at 345,079 to 346,530 _RS14310 HMPREF1078_RS14315: HMPREF1078_RS14315 - M64 family metallopeptidase, at 346,745 to 348,025 _RS14315 HMPREF1078_RS14320: HMPREF1078_RS14320 - TonB-dependent receptor, at 348,217 to 350,880 _RS14320
Locus Name Description Strand Phenotype
HMPREF1078_RS14270 HMPREF1078_RS14270 glycoside hydrolase family 43 protein + insig.
HMPREF1078_RS14275 HMPREF1078_RS14275 GH116 family glycosyl-hydrolase + insig.
HMPREF1078_RS14280 HMPREF1078_RS14280 alkaline phosphatase family protein + insig.
HMPREF1078_RS14285 HMPREF1078_RS14285 IMP dehydrogenase - strong
HMPREF1078_RS14290 HMPREF1078_RS14290 pirin family protein + insig.
HMPREF1078_RS14295 HMPREF1078_RS14295 SusC/RagA family TonB-linked outer membrane protein + cofit
HMPREF1078_RS14300 HMPREF1078_RS14300 RagB/SusD family nutrient uptake outer membrane protein + strong
HMPREF1078_RS14305 HMPREF1078_RS14305 DUF6057 family protein + cofit
HMPREF1078_RS14310 HMPREF1078_RS14310 PD40 domain-containing protein + sig.
HMPREF1078_RS14315 HMPREF1078_RS14315 M64 family metallopeptidase - insig.
HMPREF1078_RS14320 HMPREF1078_RS14320 TonB-dependent receptor + insig.

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