Gene info for HMPREF1078_RS14255 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 323,200 to 326,619
See nucleotide sequence around HMPREF1078_RS14255 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS14230 and HMPREF1078_RS14235 are separated by 29 nucleotidesHMPREF1078_RS14235 and HMPREF1078_RS14240 are separated by 52 nucleotidesHMPREF1078_RS14240 and HMPREF1078_RS14245 are separated by 152 nucleotidesHMPREF1078_RS14245 and HMPREF1078_RS14250 are separated by 118 nucleotidesHMPREF1078_RS14250 and HMPREF1078_RS14255 are separated by 317 nucleotidesHMPREF1078_RS14255 and HMPREF1078_RS14260 are separated by 19 nucleotidesHMPREF1078_RS14260 and HMPREF1078_RS14265 are separated by 86 nucleotidesHMPREF1078_RS14265 and HMPREF1078_RS14270 are separated by 16 nucleotidesHMPREF1078_RS14270 and HMPREF1078_RS14275 are separated by 570 nucleotidesHMPREF1078_RS14275 and HMPREF1078_RS14280 overlap by 4 nucleotides HMPREF1078_RS14230: HMPREF1078_RS14230 - DUF5715 family protein, at 316,409 to 317,077 _RS14230 HMPREF1078_RS14235: HMPREF1078_RS14235 - AAA domain-containing protein, at 317,107 to 320,595 _RS14235 HMPREF1078_RS14240: HMPREF1078_RS14240 - thioredoxin domain-containing protein, at 320,648 to 321,001 _RS14240 HMPREF1078_RS14245: HMPREF1078_RS14245 - RNA polymerase sigma-70 factor, at 321,154 to 321,738 _RS14245 HMPREF1078_RS14250: HMPREF1078_RS14250 - FecR family protein, at 321,857 to 322,882 _RS14250 HMPREF1078_RS14255: HMPREF1078_RS14255 - TonB-dependent receptor, at 323,200 to 326,619 _RS14255 HMPREF1078_RS14260: HMPREF1078_RS14260 - RagB/SusD family nutrient uptake outer membrane protein, at 326,639 to 328,480 _RS14260 HMPREF1078_RS14265: HMPREF1078_RS14265 - family 43 glycosylhydrolase, at 328,567 to 329,631 _RS14265 HMPREF1078_RS14270: HMPREF1078_RS14270 - glycoside hydrolase family 43 protein, at 329,648 to 330,643 _RS14270 HMPREF1078_RS14275: HMPREF1078_RS14275 - GH116 family glycosyl-hydrolase, at 331,214 to 333,757 _RS14275 HMPREF1078_RS14280: HMPREF1078_RS14280 - alkaline phosphatase family protein, at 333,754 to 334,701 _RS14280
Locus Name Description Strand Phenotype
HMPREF1078_RS14230 HMPREF1078_RS14230 DUF5715 family protein + cofit
HMPREF1078_RS14235 HMPREF1078_RS14235 AAA domain-containing protein + insig.
HMPREF1078_RS14240 HMPREF1078_RS14240 thioredoxin domain-containing protein - cofit
HMPREF1078_RS14245 HMPREF1078_RS14245 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS14250 HMPREF1078_RS14250 FecR family protein + insig.
HMPREF1078_RS14255 HMPREF1078_RS14255 TonB-dependent receptor + cofit
HMPREF1078_RS14260 HMPREF1078_RS14260 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS14265 HMPREF1078_RS14265 family 43 glycosylhydrolase + insig.
HMPREF1078_RS14270 HMPREF1078_RS14270 glycoside hydrolase family 43 protein + insig.
HMPREF1078_RS14275 HMPREF1078_RS14275 GH116 family glycosyl-hydrolase + insig.
HMPREF1078_RS14280 HMPREF1078_RS14280 alkaline phosphatase family protein + insig.

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