Gene info for HMPREF1078_RS13870 in Parabacteroides merdae CL09T00C40

Annotation: site-specific integrase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 231,152 to 232,258
See nucleotide sequence around HMPREF1078_RS13870 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13845 and HMPREF1078_RS13850 are separated by 11 nucleotidesHMPREF1078_RS13850 and HMPREF1078_RS13855 are separated by 235 nucleotidesHMPREF1078_RS13855 and HMPREF1078_RS13860 overlap by 31 nucleotidesHMPREF1078_RS13860 and HMPREF1078_RS13865 are separated by 286 nucleotidesHMPREF1078_RS13865 and HMPREF1078_RS13870 are separated by 82 nucleotidesHMPREF1078_RS13870 and HMPREF1078_RS13875 are separated by 92 nucleotidesHMPREF1078_RS13875 and HMPREF1078_RS13880 are separated by 270 nucleotidesHMPREF1078_RS13880 and HMPREF1078_RS13885 are separated by 4 nucleotidesHMPREF1078_RS13885 and HMPREF1078_RS13890 are separated by 113 nucleotidesHMPREF1078_RS13890 and HMPREF1078_RS13895 are separated by 31 nucleotides HMPREF1078_RS13845: HMPREF1078_RS13845 - DUF3987 domain-containing protein, at 226,570 to 227,937 _RS13845 HMPREF1078_RS13850: HMPREF1078_RS13850 - helix-turn-helix domain-containing protein, at 227,949 to 228,317 _RS13850 HMPREF1078_RS13855: HMPREF1078_RS13855 - restriction endonuclease, at 228,553 to 229,488 _RS13855 HMPREF1078_RS13860: HMPREF1078_RS13860 - hypothetical protein, at 229,458 to 230,264 _RS13860 HMPREF1078_RS13865: HMPREF1078_RS13865 - GNAT family N-acetyltransferase, at 230,551 to 231,069 _RS13865 HMPREF1078_RS13870: HMPREF1078_RS13870 - site-specific integrase, at 231,152 to 232,258 _RS13870 HMPREF1078_RS13875: HMPREF1078_RS13875 - helix-turn-helix domain-containing protein, at 232,351 to 233,262 _RS13875 HMPREF1078_RS13880: HMPREF1078_RS13880 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 233,533 to 234,915 _RS13880 HMPREF1078_RS13885: HMPREF1078_RS13885 - DUF362 domain-containing protein, at 234,920 to 236,041 _RS13885 HMPREF1078_RS13890: HMPREF1078_RS13890 - AAA family ATPase, at 236,155 to 237,345 _RS13890 HMPREF1078_RS13895: HMPREF1078_RS13895 - nitroreductase family protein, at 237,377 to 238,117 _RS13895
Locus Name Description Strand Phenotype
HMPREF1078_RS13845 HMPREF1078_RS13845 DUF3987 domain-containing protein - insig.
HMPREF1078_RS13850 HMPREF1078_RS13850 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS13855 HMPREF1078_RS13855 restriction endonuclease + insig.
HMPREF1078_RS13860 HMPREF1078_RS13860 hypothetical protein - insig.
HMPREF1078_RS13865 HMPREF1078_RS13865 GNAT family N-acetyltransferase - insig.
HMPREF1078_RS13870 HMPREF1078_RS13870 site-specific integrase - insig.
HMPREF1078_RS13875 HMPREF1078_RS13875 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS13880 HMPREF1078_RS13880 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE - cofit
HMPREF1078_RS13885 HMPREF1078_RS13885 DUF362 domain-containing protein - cofit
HMPREF1078_RS13890 HMPREF1078_RS13890 AAA family ATPase + insig.
HMPREF1078_RS13895 HMPREF1078_RS13895 nitroreductase family protein + cofit

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