Gene info for HMPREF1078_RS13780 in Parabacteroides merdae CL09T00C40

Annotation: HAMP domain-containing histidine kinase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 210,759 to 212,177
See nucleotide sequence around HMPREF1078_RS13780 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13755 and HMPREF1078_RS13760 overlap by 4 nucleotidesHMPREF1078_RS13760 and HMPREF1078_RS13765 are separated by 55 nucleotidesHMPREF1078_RS13765 and HMPREF1078_RS13770 are separated by 139 nucleotidesHMPREF1078_RS13770 and HMPREF1078_RS13775 are separated by 129 nucleotidesHMPREF1078_RS13775 and HMPREF1078_RS13780 overlap by 14 nucleotidesHMPREF1078_RS13780 and HMPREF1078_RS13785 are separated by 33 nucleotidesHMPREF1078_RS13785 and HMPREF1078_RS13790 are separated by 5 nucleotidesHMPREF1078_RS13790 and HMPREF1078_RS13795 are separated by 8 nucleotidesHMPREF1078_RS13795 and HMPREF1078_RS13800 are separated by 5 nucleotidesHMPREF1078_RS13800 and HMPREF1078_RS13805 are separated by 112 nucleotides HMPREF1078_RS13755: HMPREF1078_RS13755 - DUF262 domain-containing protein, at 203,766 to 205,637 _RS13755 HMPREF1078_RS13760: HMPREF1078_RS13760 - DUF262 domain-containing protein, at 205,634 to 207,583 _RS13760 HMPREF1078_RS13765: HMPREF1078_RS13765 - hypothetical protein, at 207,639 to 208,313 _RS13765 HMPREF1078_RS13770: HMPREF1078_RS13770 - IS256 family transposase, at 208,453 to 209,656 _RS13770 HMPREF1078_RS13775: HMPREF1078_RS13775 - response regulator, at 209,786 to 210,772 _RS13775 HMPREF1078_RS13780: HMPREF1078_RS13780 - HAMP domain-containing histidine kinase, at 210,759 to 212,177 _RS13780 HMPREF1078_RS13785: HMPREF1078_RS13785 - DUF87 domain-containing protein, at 212,211 to 213,797 _RS13785 HMPREF1078_RS13790: HMPREF1078_RS13790 - AAA family ATPase, at 213,803 to 215,803 _RS13790 HMPREF1078_RS13795: HMPREF1078_RS13795 - hypothetical protein, at 215,812 to 216,030 _RS13795 HMPREF1078_RS13800: HMPREF1078_RS13800 - DEAD/DEAH box helicase family protein, at 216,036 to 218,381 _RS13800 HMPREF1078_RS13805: HMPREF1078_RS13805 - site-specific DNA-methyltransferase, at 218,494 to 220,341 _RS13805
Locus Name Description Strand Phenotype
HMPREF1078_RS13755 HMPREF1078_RS13755 DUF262 domain-containing protein + insig.
HMPREF1078_RS13760 HMPREF1078_RS13760 DUF262 domain-containing protein + insig.
HMPREF1078_RS13765 HMPREF1078_RS13765 hypothetical protein + insig.
HMPREF1078_RS13770 HMPREF1078_RS13770 IS256 family transposase - insig.
HMPREF1078_RS13775 HMPREF1078_RS13775 response regulator - strong
HMPREF1078_RS13780 HMPREF1078_RS13780 HAMP domain-containing histidine kinase - strong
HMPREF1078_RS13785 HMPREF1078_RS13785 DUF87 domain-containing protein - strong
HMPREF1078_RS13790 HMPREF1078_RS13790 AAA family ATPase - strong
HMPREF1078_RS13795 HMPREF1078_RS13795 hypothetical protein - strong
HMPREF1078_RS13800 HMPREF1078_RS13800 DEAD/DEAH box helicase family protein - strong
HMPREF1078_RS13805 HMPREF1078_RS13805 site-specific DNA-methyltransferase - strong

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