Gene info for HMPREF1078_RS13690 in Parabacteroides merdae CL09T00C40

Annotation: 3'-5' exonuclease
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 189,887 to 190,468
See nucleotide sequence around HMPREF1078_RS13690 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13665 and HMPREF1078_RS13670 are separated by 31 nucleotidesHMPREF1078_RS13670 and HMPREF1078_RS13675 are separated by 113 nucleotidesHMPREF1078_RS13675 and HMPREF1078_RS13680 are separated by 528 nucleotidesHMPREF1078_RS13680 and HMPREF1078_RS13685 are separated by 191 nucleotidesHMPREF1078_RS13685 and HMPREF1078_RS13690 are separated by 0 nucleotidesHMPREF1078_RS13690 and HMPREF1078_RS13695 overlap by 4 nucleotidesHMPREF1078_RS13695 and HMPREF1078_RS13700 are separated by 193 nucleotidesHMPREF1078_RS13700 and HMPREF1078_RS13705 are separated by 116 nucleotidesHMPREF1078_RS13705 and HMPREF1078_RS13710 are separated by 79 nucleotidesHMPREF1078_RS13710 and HMPREF1078_RS13715 are separated by 24 nucleotides HMPREF1078_RS13665: HMPREF1078_RS13665 - TolC family protein, at 183,996 to 185,387 _RS13665 HMPREF1078_RS13670: HMPREF1078_RS13670 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 185,419 to 186,186 _RS13670 HMPREF1078_RS13675: HMPREF1078_RS13675 - DUF1080 domain-containing protein, at 186,300 to 187,040 _RS13675 HMPREF1078_RS13680: HMPREF1078_RS13680 - malate dehydrogenase, at 187,569 to 188,510 _RS13680 HMPREF1078_RS13685: HMPREF1078_RS13685 - class I SAM-dependent rRNA methyltransferase, at 188,702 to 189,886 _RS13685 HMPREF1078_RS13690: HMPREF1078_RS13690 - 3'-5' exonuclease, at 189,887 to 190,468 _RS13690 HMPREF1078_RS13695: HMPREF1078_RS13695 - DUF5063 domain-containing protein, at 190,465 to 191,010 _RS13695 HMPREF1078_RS13700: HMPREF1078_RS13700 - DNA translocase FtsK, at 191,204 to 193,702 _RS13700 HMPREF1078_RS13705: HMPREF1078_RS13705 - LolA-like putative outer membrane lipoprotein chaperone, at 193,819 to 194,487 _RS13705 HMPREF1078_RS13710: HMPREF1078_RS13710 - thioredoxin-disulfide reductase, at 194,567 to 195,520 _RS13710 HMPREF1078_RS13715: HMPREF1078_RS13715 - glycerophosphodiester phosphodiesterase family protein, at 195,545 to 196,321 _RS13715
Locus Name Description Strand Phenotype
HMPREF1078_RS13665 HMPREF1078_RS13665 TolC family protein + insig.
HMPREF1078_RS13670 HMPREF1078_RS13670 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase + insig.
HMPREF1078_RS13675 HMPREF1078_RS13675 DUF1080 domain-containing protein + insig.
HMPREF1078_RS13680 HMPREF1078_RS13680 malate dehydrogenase - cofit
HMPREF1078_RS13685 HMPREF1078_RS13685 class I SAM-dependent rRNA methyltransferase - cofit
HMPREF1078_RS13690 HMPREF1078_RS13690 3'-5' exonuclease - strong
HMPREF1078_RS13695 HMPREF1078_RS13695 DUF5063 domain-containing protein - strong
HMPREF1078_RS13700 HMPREF1078_RS13700 DNA translocase FtsK + insig.
HMPREF1078_RS13705 HMPREF1078_RS13705 LolA-like putative outer membrane lipoprotein chaperone + no data
HMPREF1078_RS13710 HMPREF1078_RS13710 thioredoxin-disulfide reductase + insig.
HMPREF1078_RS13715 HMPREF1078_RS13715 glycerophosphodiester phosphodiesterase family protein + cofit

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