Gene info for HMPREF1078_RS13665 in Parabacteroides merdae CL09T00C40

Annotation: TolC family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 183,996 to 185,387
See nucleotide sequence around HMPREF1078_RS13665 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13640 and HMPREF1078_RS13645 are separated by 132 nucleotidesHMPREF1078_RS13645 and HMPREF1078_RS13650 are separated by 68 nucleotidesHMPREF1078_RS13650 and HMPREF1078_RS13655 are separated by 378 nucleotidesHMPREF1078_RS13655 and HMPREF1078_RS13660 are separated by 32 nucleotidesHMPREF1078_RS13660 and HMPREF1078_RS13665 are separated by 3 nucleotidesHMPREF1078_RS13665 and HMPREF1078_RS13670 are separated by 31 nucleotidesHMPREF1078_RS13670 and HMPREF1078_RS13675 are separated by 113 nucleotidesHMPREF1078_RS13675 and HMPREF1078_RS13680 are separated by 528 nucleotidesHMPREF1078_RS13680 and HMPREF1078_RS13685 are separated by 191 nucleotidesHMPREF1078_RS13685 and HMPREF1078_RS13690 are separated by 0 nucleotides HMPREF1078_RS13640: HMPREF1078_RS13640 - SDR family oxidoreductase, at 176,444 to 177,256 _RS13640 HMPREF1078_RS13645: HMPREF1078_RS13645 - LacI family DNA-binding transcriptional regulator, at 177,389 to 178,444 _RS13645 HMPREF1078_RS13650: HMPREF1078_RS13650 - hypothetical protein, at 178,513 to 179,151 _RS13650 HMPREF1078_RS13655: HMPREF1078_RS13655 - efflux RND transporter periplasmic adaptor subunit, at 179,530 to 180,741 _RS13655 HMPREF1078_RS13660: HMPREF1078_RS13660 - efflux RND transporter permease subunit, at 180,774 to 183,992 _RS13660 HMPREF1078_RS13665: HMPREF1078_RS13665 - TolC family protein, at 183,996 to 185,387 _RS13665 HMPREF1078_RS13670: HMPREF1078_RS13670 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 185,419 to 186,186 _RS13670 HMPREF1078_RS13675: HMPREF1078_RS13675 - DUF1080 domain-containing protein, at 186,300 to 187,040 _RS13675 HMPREF1078_RS13680: HMPREF1078_RS13680 - malate dehydrogenase, at 187,569 to 188,510 _RS13680 HMPREF1078_RS13685: HMPREF1078_RS13685 - class I SAM-dependent rRNA methyltransferase, at 188,702 to 189,886 _RS13685 HMPREF1078_RS13690: HMPREF1078_RS13690 - 3'-5' exonuclease, at 189,887 to 190,468 _RS13690
Locus Name Description Strand Phenotype
HMPREF1078_RS13640 HMPREF1078_RS13640 SDR family oxidoreductase - strong
HMPREF1078_RS13645 HMPREF1078_RS13645 LacI family DNA-binding transcriptional regulator - strong
HMPREF1078_RS13650 HMPREF1078_RS13650 hypothetical protein - strong
HMPREF1078_RS13655 HMPREF1078_RS13655 efflux RND transporter periplasmic adaptor subunit + cofit
HMPREF1078_RS13660 HMPREF1078_RS13660 efflux RND transporter permease subunit + cofit
HMPREF1078_RS13665 HMPREF1078_RS13665 TolC family protein + insig.
HMPREF1078_RS13670 HMPREF1078_RS13670 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase + insig.
HMPREF1078_RS13675 HMPREF1078_RS13675 DUF1080 domain-containing protein + insig.
HMPREF1078_RS13680 HMPREF1078_RS13680 malate dehydrogenase - strong
HMPREF1078_RS13685 HMPREF1078_RS13685 class I SAM-dependent rRNA methyltransferase - insig.
HMPREF1078_RS13690 HMPREF1078_RS13690 3'-5' exonuclease - strong

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