Gene info for HMPREF1078_RS13645 in Parabacteroides merdae CL09T00C40

Annotation: LacI family DNA-binding transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 177,389 to 178,444
See nucleotide sequence around HMPREF1078_RS13645 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13620 and HMPREF1078_RS13625 are separated by 187 nucleotidesHMPREF1078_RS13625 and HMPREF1078_RS13630 are separated by 9 nucleotidesHMPREF1078_RS13630 and HMPREF1078_RS13635 are separated by 129 nucleotidesHMPREF1078_RS13635 and HMPREF1078_RS13640 are separated by 24 nucleotidesHMPREF1078_RS13640 and HMPREF1078_RS13645 are separated by 132 nucleotidesHMPREF1078_RS13645 and HMPREF1078_RS13650 are separated by 68 nucleotidesHMPREF1078_RS13650 and HMPREF1078_RS13655 are separated by 378 nucleotidesHMPREF1078_RS13655 and HMPREF1078_RS13660 are separated by 32 nucleotidesHMPREF1078_RS13660 and HMPREF1078_RS13665 are separated by 3 nucleotidesHMPREF1078_RS13665 and HMPREF1078_RS13670 are separated by 31 nucleotides HMPREF1078_RS13620: HMPREF1078_RS13620 - DUF6198 family protein, at 172,795 to 173,466 _RS13620 HMPREF1078_RS13625: HMPREF1078_RS13625 - MarC family protein, at 173,654 to 174,253 _RS13625 HMPREF1078_RS13630: HMPREF1078_RS13630 - M23 family metallopeptidase, at 174,263 to 175,117 _RS13630 HMPREF1078_RS13635: HMPREF1078_RS13635 - mannonate dehydratase, at 175,247 to 176,419 _RS13635 HMPREF1078_RS13640: HMPREF1078_RS13640 - SDR family oxidoreductase, at 176,444 to 177,256 _RS13640 HMPREF1078_RS13645: HMPREF1078_RS13645 - LacI family DNA-binding transcriptional regulator, at 177,389 to 178,444 _RS13645 HMPREF1078_RS13650: HMPREF1078_RS13650 - hypothetical protein, at 178,513 to 179,151 _RS13650 HMPREF1078_RS13655: HMPREF1078_RS13655 - efflux RND transporter periplasmic adaptor subunit, at 179,530 to 180,741 _RS13655 HMPREF1078_RS13660: HMPREF1078_RS13660 - efflux RND transporter permease subunit, at 180,774 to 183,992 _RS13660 HMPREF1078_RS13665: HMPREF1078_RS13665 - TolC family protein, at 183,996 to 185,387 _RS13665 HMPREF1078_RS13670: HMPREF1078_RS13670 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 185,419 to 186,186 _RS13670
Locus Name Description Strand Phenotype
HMPREF1078_RS13620 HMPREF1078_RS13620 DUF6198 family protein - insig.
HMPREF1078_RS13625 HMPREF1078_RS13625 MarC family protein + insig.
HMPREF1078_RS13630 HMPREF1078_RS13630 M23 family metallopeptidase - insig.
HMPREF1078_RS13635 HMPREF1078_RS13635 mannonate dehydratase - strong
HMPREF1078_RS13640 HMPREF1078_RS13640 SDR family oxidoreductase - strong
HMPREF1078_RS13645 HMPREF1078_RS13645 LacI family DNA-binding transcriptional regulator - strong
HMPREF1078_RS13650 HMPREF1078_RS13650 hypothetical protein - strong
HMPREF1078_RS13655 HMPREF1078_RS13655 efflux RND transporter periplasmic adaptor subunit + cofit
HMPREF1078_RS13660 HMPREF1078_RS13660 efflux RND transporter permease subunit + cofit
HMPREF1078_RS13665 HMPREF1078_RS13665 TolC family protein + insig.
HMPREF1078_RS13670 HMPREF1078_RS13670 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase + insig.

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