Gene info for HMPREF1078_RS13595 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 88 protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 164,511 to 165,626
See nucleotide sequence around HMPREF1078_RS13595 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13575 and HMPREF1078_RS13580 are separated by 769 nucleotidesHMPREF1078_RS13580 and HMPREF1078_RS13585 are separated by 166 nucleotidesHMPREF1078_RS13585 and HMPREF1078_RS18880 are separated by 254 nucleotidesHMPREF1078_RS18880 and HMPREF1078_RS13590 are separated by 97 nucleotidesHMPREF1078_RS13590 and HMPREF1078_RS13595 are separated by 91 nucleotidesHMPREF1078_RS13595 and HMPREF1078_RS13600 are separated by 62 nucleotidesHMPREF1078_RS13600 and HMPREF1078_RS13605 are separated by 19 nucleotidesHMPREF1078_RS13605 and HMPREF1078_RS13610 are separated by 224 nucleotidesHMPREF1078_RS13610 and HMPREF1078_RS13615 are separated by 59 nucleotidesHMPREF1078_RS13615 and HMPREF1078_RS13620 are separated by 48 nucleotides HMPREF1078_RS13575: HMPREF1078_RS13575 - imidazole glycerol phosphate synthase subunit HisH, at 161,272 to 161,862 _RS13575 HMPREF1078_RS13580: HMPREF1078_RS13580 - tRNA-Asp, at 162,632 to 162,705 _RS13580 HMPREF1078_RS13585: HMPREF1078_RS13585 - DNA-3-methyladenine glycosylase I, at 162,872 to 163,465 _RS13585 HMPREF1078_RS18880: HMPREF1078_RS18880 - hypothetical protein, at 163,720 to 163,857 _RS18880 HMPREF1078_RS13590: HMPREF1078_RS13590 - cold shock domain-containing protein, at 163,955 to 164,419 _RS13590 HMPREF1078_RS13595: HMPREF1078_RS13595 - glycoside hydrolase family 88 protein, at 164,511 to 165,626 _RS13595 HMPREF1078_RS13600: HMPREF1078_RS13600 - RagB/SusD family nutrient uptake outer membrane protein, at 165,689 to 167,404 _RS13600 HMPREF1078_RS13605: HMPREF1078_RS13605 - TonB-dependent receptor, at 167,424 to 170,747 _RS13605 HMPREF1078_RS13610: HMPREF1078_RS13610 - FecR domain-containing protein, at 170,972 to 172,132 _RS13610 HMPREF1078_RS13615: HMPREF1078_RS13615 - RNA polymerase sigma factor, at 172,192 to 172,746 _RS13615 HMPREF1078_RS13620: HMPREF1078_RS13620 - DUF6198 family protein, at 172,795 to 173,466 _RS13620
Locus Name Description Strand Phenotype
HMPREF1078_RS13575 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH - strong
HMPREF1078_RS13580 HMPREF1078_RS13580 tRNA-Asp + no data
HMPREF1078_RS13585 HMPREF1078_RS13585 DNA-3-methyladenine glycosylase I + insig.
HMPREF1078_RS18880 HMPREF1078_RS18880 hypothetical protein + insig.
HMPREF1078_RS13590 HMPREF1078_RS13590 cold shock domain-containing protein + insig.
HMPREF1078_RS13595 HMPREF1078_RS13595 glycoside hydrolase family 88 protein - insig.
HMPREF1078_RS13600 HMPREF1078_RS13600 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS13605 HMPREF1078_RS13605 TonB-dependent receptor - insig.
HMPREF1078_RS13610 HMPREF1078_RS13610 FecR domain-containing protein - insig.
HMPREF1078_RS13615 HMPREF1078_RS13615 RNA polymerase sigma factor - insig.
HMPREF1078_RS13620 HMPREF1078_RS13620 DUF6198 family protein - insig.

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