Gene info for HMPREF1078_RS13555 in Parabacteroides merdae CL09T00C40

Annotation: ATP-binding cassette domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 158,337 to 159,014
See nucleotide sequence around HMPREF1078_RS13555 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13530 and HMPREF1078_RS13535 are separated by 65 nucleotidesHMPREF1078_RS13535 and HMPREF1078_RS13540 are separated by 32 nucleotidesHMPREF1078_RS13540 and HMPREF1078_RS13545 are separated by 179 nucleotidesHMPREF1078_RS13545 and HMPREF1078_RS13550 are separated by 176 nucleotidesHMPREF1078_RS13550 and HMPREF1078_RS13555 are separated by 64 nucleotidesHMPREF1078_RS13555 and HMPREF1078_RS13560 are separated by 5 nucleotidesHMPREF1078_RS13560 and HMPREF1078_RS13565 are separated by 155 nucleotidesHMPREF1078_RS13565 and HMPREF1078_RS13570 are separated by 18 nucleotidesHMPREF1078_RS13570 and HMPREF1078_RS13575 are separated by 6 nucleotidesHMPREF1078_RS13575 and HMPREF1078_RS13580 are separated by 769 nucleotides HMPREF1078_RS13530: HMPREF1078_RS13530 - pyridoxal phosphate-dependent aminotransferase, at 151,716 to 152,915 _RS13530 HMPREF1078_RS13535: HMPREF1078_RS13535 - ABC transporter permease, at 152,981 to 154,225 _RS13535 HMPREF1078_RS13540: HMPREF1078_RS13540 - glycosyltransferase, at 154,258 to 155,436 _RS13540 HMPREF1078_RS13545: HMPREF1078_RS13545 - diaminopimelate decarboxylase, at 155,616 to 156,776 _RS13545 HMPREF1078_RS13550: HMPREF1078_RS13550 - aspartate kinase, at 156,953 to 158,272 _RS13550 HMPREF1078_RS13555: HMPREF1078_RS13555 - ATP-binding cassette domain-containing protein, at 158,337 to 159,014 _RS13555 HMPREF1078_RS13560: HMPREF1078_RS13560 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE, at 159,020 to 159,616 _RS13560 HMPREF1078_RS13565: HMPREF1078_RS13565 - imidazole glycerol phosphate synthase subunit HisF, at 159,772 to 160,527 _RS13565 HMPREF1078_RS13570: HMPREF1078_RS13570 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 160,546 to 161,265 _RS13570 HMPREF1078_RS13575: HMPREF1078_RS13575 - imidazole glycerol phosphate synthase subunit HisH, at 161,272 to 161,862 _RS13575 HMPREF1078_RS13580: HMPREF1078_RS13580 - tRNA-Asp, at 162,632 to 162,705 _RS13580
Locus Name Description Strand Phenotype
HMPREF1078_RS13530 HMPREF1078_RS13530 pyridoxal phosphate-dependent aminotransferase + strong
HMPREF1078_RS13535 HMPREF1078_RS13535 ABC transporter permease + no data
HMPREF1078_RS13540 HMPREF1078_RS13540 glycosyltransferase - cofit
HMPREF1078_RS13545 HMPREF1078_RS13545 diaminopimelate decarboxylase - strong
HMPREF1078_RS13550 HMPREF1078_RS13550 aspartate kinase - strong
HMPREF1078_RS13555 HMPREF1078_RS13555 ATP-binding cassette domain-containing protein - strong
HMPREF1078_RS13560 HMPREF1078_RS13560 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE - strong
HMPREF1078_RS13565 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF - strong
HMPREF1078_RS13570 HMPREF1078_RS13570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase - strong
HMPREF1078_RS13575 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH - strong
HMPREF1078_RS13580 HMPREF1078_RS13580 tRNA-Asp + no data

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