Gene info for HMPREF1078_RS13410 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, - strand, nucleotides 120,027 to 122,351
See nucleotide sequence around HMPREF1078_RS13410 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13385 and HMPREF1078_RS13390 are separated by 32 nucleotidesHMPREF1078_RS13390 and HMPREF1078_RS13395 are separated by 4 nucleotidesHMPREF1078_RS13395 and HMPREF1078_RS13400 overlap by 4 nucleotidesHMPREF1078_RS13400 and HMPREF1078_RS13405 are separated by 286 nucleotidesHMPREF1078_RS13405 and HMPREF1078_RS13410 are separated by 3 nucleotidesHMPREF1078_RS13410 and HMPREF1078_RS13415 are separated by 84 nucleotidesHMPREF1078_RS13415 and HMPREF1078_RS13420 are separated by 11 nucleotidesHMPREF1078_RS13420 and HMPREF1078_RS13425 are separated by 24 nucleotidesHMPREF1078_RS13425 and HMPREF1078_RS13430 are separated by 3 nucleotidesHMPREF1078_RS13430 and HMPREF1078_RS13435 are separated by 35 nucleotides HMPREF1078_RS13385: HMPREF1078_RS13385 - DUF2007 domain-containing protein, at 113,283 to 113,672 _RS13385 HMPREF1078_RS13390: HMPREF1078_RS13390 - protoporphyrinogen oxidase, at 113,705 to 115,081 _RS13390 HMPREF1078_RS13395: HMPREF1078_RS13395 - oxygen-independent coproporphyrinogen III oxidase, at 115,086 to 116,453 _RS13395 HMPREF1078_RS13400: HMPREF1078_RS13400 - MFS transporter, at 116,450 to 117,655 _RS13400 HMPREF1078_RS13405: HMPREF1078_RS13405 - TonB-dependent receptor, at 117,942 to 120,023 _RS13405 HMPREF1078_RS13410: HMPREF1078_RS13410 - TonB-dependent receptor, at 120,027 to 122,351 _RS13410 HMPREF1078_RS13415: HMPREF1078_RS13415 - LuxR C-terminal-related transcriptional regulator, at 122,436 to 123,014 _RS13415 HMPREF1078_RS13420: HMPREF1078_RS13420 - hypothetical protein, at 123,026 to 123,715 _RS13420 HMPREF1078_RS13425: HMPREF1078_RS13425 - sugar phosphate isomerase/epimerase, at 123,740 to 124,681 _RS13425 HMPREF1078_RS13430: HMPREF1078_RS13430 - Gfo/Idh/MocA family oxidoreductase, at 124,685 to 126,070 _RS13430 HMPREF1078_RS13435: HMPREF1078_RS13435 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 126,106 to 127,686 _RS13435
Locus Name Description Strand Phenotype
HMPREF1078_RS13385 HMPREF1078_RS13385 DUF2007 domain-containing protein - insig.
HMPREF1078_RS13390 HMPREF1078_RS13390 protoporphyrinogen oxidase - insig.
HMPREF1078_RS13395 HMPREF1078_RS13395 oxygen-independent coproporphyrinogen III oxidase - insig.
HMPREF1078_RS13400 HMPREF1078_RS13400 MFS transporter - insig.
HMPREF1078_RS13405 HMPREF1078_RS13405 TonB-dependent receptor - insig.
HMPREF1078_RS13410 HMPREF1078_RS13410 TonB-dependent receptor - no data
HMPREF1078_RS13415 HMPREF1078_RS13415 LuxR C-terminal-related transcriptional regulator - insig.
HMPREF1078_RS13420 HMPREF1078_RS13420 hypothetical protein - insig.
HMPREF1078_RS13425 HMPREF1078_RS13425 sugar phosphate isomerase/epimerase - cofit
HMPREF1078_RS13430 HMPREF1078_RS13430 Gfo/Idh/MocA family oxidoreductase - strong
HMPREF1078_RS13435 HMPREF1078_RS13435 SUMF1/EgtB/PvdO family nonheme iron enzyme - strong

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