Gene info for HMPREF1078_RS13290 in Parabacteroides merdae CL09T00C40

Annotation: porin family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 89,459 to 90,244
See nucleotide sequence around HMPREF1078_RS13290 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13265 and HMPREF1078_RS13270 are separated by 1 nucleotidesHMPREF1078_RS13270 and HMPREF1078_RS13275 are separated by 21 nucleotidesHMPREF1078_RS13275 and HMPREF1078_RS13280 are separated by 112 nucleotidesHMPREF1078_RS13280 and HMPREF1078_RS13285 are separated by 175 nucleotidesHMPREF1078_RS13285 and HMPREF1078_RS13290 are separated by 14 nucleotidesHMPREF1078_RS13290 and HMPREF1078_RS13295 are separated by 326 nucleotidesHMPREF1078_RS13295 and HMPREF1078_RS13300 are separated by 132 nucleotidesHMPREF1078_RS13300 and HMPREF1078_RS13305 are separated by 63 nucleotidesHMPREF1078_RS13305 and HMPREF1078_RS13310 are separated by 82 nucleotidesHMPREF1078_RS13310 and HMPREF1078_RS13315 overlap by 4 nucleotides HMPREF1078_RS13265: HMPREF1078_RS13265 - HAMP domain-containing sensor histidine kinase, at 84,870 to 85,991 _RS13265 HMPREF1078_RS13270: HMPREF1078_RS13270 - ATP-binding protein, at 85,993 to 86,403 _RS13270 HMPREF1078_RS13275: HMPREF1078_RS13275 - STAS domain-containing protein, at 86,425 to 86,724 _RS13275 HMPREF1078_RS13280: HMPREF1078_RS13280 - Gfo/Idh/MocA family oxidoreductase, at 86,837 to 88,150 _RS13280 HMPREF1078_RS13285: HMPREF1078_RS13285 - PCMD domain-containing protein, at 88,326 to 89,444 _RS13285 HMPREF1078_RS13290: HMPREF1078_RS13290 - porin family protein, at 89,459 to 90,244 _RS13290 HMPREF1078_RS13295: HMPREF1078_RS13295 - Gfo/Idh/MocA family oxidoreductase, at 90,571 to 91,923 _RS13295 HMPREF1078_RS13300: HMPREF1078_RS13300 - sulfatase, at 92,056 to 93,630 _RS13300 HMPREF1078_RS13305: HMPREF1078_RS13305 - tRNA-Ala, at 93,694 to 93,767 _RS13305 HMPREF1078_RS13310: HMPREF1078_RS13310 - DUF4286 family protein, at 93,850 to 94,164 _RS13310 HMPREF1078_RS13315: HMPREF1078_RS13315 - crossover junction endodeoxyribonuclease RuvC, at 94,161 to 94,718 _RS13315
Locus Name Description Strand Phenotype
HMPREF1078_RS13265 HMPREF1078_RS13265 HAMP domain-containing sensor histidine kinase - insig.
HMPREF1078_RS13270 HMPREF1078_RS13270 ATP-binding protein - strong
HMPREF1078_RS13275 HMPREF1078_RS13275 STAS domain-containing protein - sig.
HMPREF1078_RS13280 HMPREF1078_RS13280 Gfo/Idh/MocA family oxidoreductase - insig.
HMPREF1078_RS13285 HMPREF1078_RS13285 PCMD domain-containing protein + insig.
HMPREF1078_RS13290 HMPREF1078_RS13290 porin family protein + insig.
HMPREF1078_RS13295 HMPREF1078_RS13295 Gfo/Idh/MocA family oxidoreductase + insig.
HMPREF1078_RS13300 HMPREF1078_RS13300 sulfatase + insig.
HMPREF1078_RS13305 HMPREF1078_RS13305 tRNA-Ala - insig.
HMPREF1078_RS13310 HMPREF1078_RS13310 DUF4286 family protein + insig.
HMPREF1078_RS13315 HMPREF1078_RS13315 crossover junction endodeoxyribonuclease RuvC + sig.

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