Gene info for HMPREF1078_RS13215 in Parabacteroides merdae CL09T00C40

Annotation: valine--tRNA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 72,251 to 74,878
See nucleotide sequence around HMPREF1078_RS13215 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19945 and HMPREF1078_RS13195 are separated by 169 nucleotidesHMPREF1078_RS13195 and HMPREF1078_RS13200 are separated by 6 nucleotidesHMPREF1078_RS13200 and HMPREF1078_RS13205 are separated by 482 nucleotidesHMPREF1078_RS13205 and HMPREF1078_RS13210 overlap by 4 nucleotidesHMPREF1078_RS13210 and HMPREF1078_RS13215 are separated by 821 nucleotidesHMPREF1078_RS13215 and HMPREF1078_RS13220 are separated by 289 nucleotidesHMPREF1078_RS13220 and HMPREF1078_RS13225 are separated by 90 nucleotidesHMPREF1078_RS13225 and HMPREF1078_RS13230 are separated by 69 nucleotidesHMPREF1078_RS13230 and HMPREF1078_RS13235 are separated by 39 nucleotidesHMPREF1078_RS13235 and HMPREF1078_RS13240 are separated by 103 nucleotides HMPREF1078_RS19945: HMPREF1078_RS19945 - IS5/IS1182 family transposase, at 65,302 to 65,385 _RS19945 HMPREF1078_RS13195: HMPREF1078_RS13195 - TlpA disulfide reductase family protein, at 65,555 to 67,006 _RS13195 HMPREF1078_RS13200: HMPREF1078_RS13200 - hypothetical protein, at 67,013 to 69,613 _RS13200 HMPREF1078_RS13205: HMPREF1078_RS13205 - IS3 family transposase, at 70,096 to 71,004 _RS13205 HMPREF1078_RS13210: HMPREF1078_RS13210 - hypothetical protein, at 71,001 to 71,429 _RS13210 HMPREF1078_RS13215: HMPREF1078_RS13215 - valine--tRNA ligase, at 72,251 to 74,878 _RS13215 HMPREF1078_RS13220: HMPREF1078_RS13220 - sugar phosphate isomerase/epimerase, at 75,168 to 76,019 _RS13220 HMPREF1078_RS13225: HMPREF1078_RS13225 - DUF6340 family protein, at 76,110 to 77,141 _RS13225 HMPREF1078_RS13230: HMPREF1078_RS13230 - hypothetical protein, at 77,211 to 77,672 _RS13230 HMPREF1078_RS13235: HMPREF1078_RS13235 - tRNA-Thr, at 77,712 to 77,784 _RS13235 HMPREF1078_RS13240: HMPREF1078_RS13240 - phage integrase SAM-like domain-containing protein, at 77,888 to 78,373 _RS13240
Locus Name Description Strand Phenotype
HMPREF1078_RS19945 HMPREF1078_RS19945 IS5/IS1182 family transposase - no data
HMPREF1078_RS13195 HMPREF1078_RS13195 TlpA disulfide reductase family protein + insig.
HMPREF1078_RS13200 HMPREF1078_RS13200 hypothetical protein + insig.
HMPREF1078_RS13205 HMPREF1078_RS13205 IS3 family transposase - no data
HMPREF1078_RS13210 HMPREF1078_RS13210 hypothetical protein - no data
HMPREF1078_RS13215 HMPREF1078_RS13215 valine--tRNA ligase + no data
HMPREF1078_RS13220 HMPREF1078_RS13220 sugar phosphate isomerase/epimerase + insig.
HMPREF1078_RS13225 HMPREF1078_RS13225 DUF6340 family protein + sig.
HMPREF1078_RS13230 HMPREF1078_RS13230 hypothetical protein + sig.
HMPREF1078_RS13235 HMPREF1078_RS13235 tRNA-Thr + strong
HMPREF1078_RS13240 HMPREF1078_RS13240 phage integrase SAM-like domain-containing protein + insig.

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