Gene info for HMPREF1078_RS13100 in Parabacteroides merdae CL09T00C40

Annotation: YIP1 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 46,170 to 46,760
See nucleotide sequence around HMPREF1078_RS13100 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13075 and HMPREF1078_RS13080 are separated by 738 nucleotidesHMPREF1078_RS13080 and HMPREF1078_RS13085 are separated by 30 nucleotidesHMPREF1078_RS13085 and HMPREF1078_RS13090 are separated by 95 nucleotidesHMPREF1078_RS13090 and HMPREF1078_RS13095 are separated by 263 nucleotidesHMPREF1078_RS13095 and HMPREF1078_RS13100 are separated by 3 nucleotidesHMPREF1078_RS13100 and HMPREF1078_RS13105 overlap by 7 nucleotidesHMPREF1078_RS13105 and HMPREF1078_RS13110 are separated by 38 nucleotidesHMPREF1078_RS13110 and HMPREF1078_RS13115 are separated by 93 nucleotidesHMPREF1078_RS13115 and HMPREF1078_RS13120 are separated by 224 nucleotidesHMPREF1078_RS13120 and HMPREF1078_RS13125 are separated by 8 nucleotides HMPREF1078_RS13075: HMPREF1078_RS13075 - GH92 family glycosyl hydrolase, at 36,107 to 38,431 _RS13075 HMPREF1078_RS13080: HMPREF1078_RS13080 - TonB-dependent receptor, at 39,170 to 42,235 _RS13080 HMPREF1078_RS13085: HMPREF1078_RS13085 - RagB/SusD family nutrient uptake outer membrane protein, at 42,266 to 44,131 _RS13085 HMPREF1078_RS13090: HMPREF1078_RS13090 - C1 family peptidase, at 44,227 to 45,621 _RS13090 HMPREF1078_RS13095: HMPREF1078_RS13095 - DUF2089 family protein, at 45,885 to 46,166 _RS13095 HMPREF1078_RS13100: HMPREF1078_RS13100 - YIP1 family protein, at 46,170 to 46,760 _RS13100 HMPREF1078_RS13105: HMPREF1078_RS13105 - HAD hydrolase-like protein, at 46,754 to 47,410 _RS13105 HMPREF1078_RS13110: HMPREF1078_RS13110 - gamma carbonic anhydrase family protein, at 47,449 to 47,970 _RS13110 HMPREF1078_RS13115: HMPREF1078_RS13115 - aminopeptidase P family protein, at 48,064 to 49,854 _RS13115 HMPREF1078_RS13120: HMPREF1078_RS13120 - dihydrofolate reductase, at 50,079 to 52,136 _RS13120 HMPREF1078_RS13125: HMPREF1078_RS13125 - DNA alkylation repair protein, at 52,145 to 52,828 _RS13125
Locus Name Description Strand Phenotype
HMPREF1078_RS13075 HMPREF1078_RS13075 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS13080 HMPREF1078_RS13080 TonB-dependent receptor + insig.
HMPREF1078_RS13085 HMPREF1078_RS13085 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS13090 HMPREF1078_RS13090 C1 family peptidase - cofit
HMPREF1078_RS13095 HMPREF1078_RS13095 DUF2089 family protein + sig.
HMPREF1078_RS13100 HMPREF1078_RS13100 YIP1 family protein + insig.
HMPREF1078_RS13105 HMPREF1078_RS13105 HAD hydrolase-like protein - insig.
HMPREF1078_RS13110 HMPREF1078_RS13110 gamma carbonic anhydrase family protein - insig.
HMPREF1078_RS13115 HMPREF1078_RS13115 aminopeptidase P family protein - insig.
HMPREF1078_RS13120 HMPREF1078_RS13120 dihydrofolate reductase + insig.
HMPREF1078_RS13125 HMPREF1078_RS13125 DNA alkylation repair protein + insig.

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