Gene info for HMPREF1078_RS13055 in Parabacteroides merdae CL09T00C40

Annotation: low molecular weight protein-tyrosine-phosphatase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 30,542 to 31,051
See nucleotide sequence around HMPREF1078_RS13055 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS13030 and HMPREF1078_RS13035 overlap by 8 nucleotidesHMPREF1078_RS13035 and HMPREF1078_RS13040 are separated by 77 nucleotidesHMPREF1078_RS13040 and HMPREF1078_RS13045 are separated by 190 nucleotidesHMPREF1078_RS13045 and HMPREF1078_RS13050 are separated by 113 nucleotidesHMPREF1078_RS13050 and HMPREF1078_RS13055 are separated by 77 nucleotidesHMPREF1078_RS13055 and HMPREF1078_RS13060 overlap by 26 nucleotidesHMPREF1078_RS13060 and HMPREF1078_RS13065 are separated by 172 nucleotidesHMPREF1078_RS13065 and HMPREF1078_RS13070 are separated by 20 nucleotidesHMPREF1078_RS13070 and HMPREF1078_RS13075 are separated by 104 nucleotidesHMPREF1078_RS13075 and HMPREF1078_RS13080 are separated by 738 nucleotides HMPREF1078_RS13030: HMPREF1078_RS13030 - tetraacyldisaccharide 4'-kinase, at 24,824 to 25,936 _RS13030 HMPREF1078_RS13035: HMPREF1078_RS13035 - thiamine-phosphate kinase, at 25,929 to 26,960 _RS13035 HMPREF1078_RS13040: HMPREF1078_RS13040 - tRNA-Phe, at 27,038 to 27,110 _RS13040 HMPREF1078_RS13045: HMPREF1078_RS13045 - porin family protein, at 27,301 to 27,888 _RS13045 HMPREF1078_RS13050: HMPREF1078_RS13050 - primosomal protein N', at 28,002 to 30,464 _RS13050 HMPREF1078_RS13055: HMPREF1078_RS13055 - low molecular weight protein-tyrosine-phosphatase, at 30,542 to 31,051 _RS13055 HMPREF1078_RS13060: HMPREF1078_RS13060 - HDIG domain-containing protein, at 31,026 to 33,056 _RS13060 HMPREF1078_RS13065: HMPREF1078_RS13065 - glutamate--tRNA ligase, at 33,229 to 34,755 _RS13065 HMPREF1078_RS13070: HMPREF1078_RS13070 - glycosyltransferase N-terminal domain-containing protein, at 34,776 to 36,002 _RS13070 HMPREF1078_RS13075: HMPREF1078_RS13075 - GH92 family glycosyl hydrolase, at 36,107 to 38,431 _RS13075 HMPREF1078_RS13080: HMPREF1078_RS13080 - TonB-dependent receptor, at 39,170 to 42,235 _RS13080
Locus Name Description Strand Phenotype
HMPREF1078_RS13030 HMPREF1078_RS13030 tetraacyldisaccharide 4'-kinase + no data
HMPREF1078_RS13035 HMPREF1078_RS13035 thiamine-phosphate kinase + no data
HMPREF1078_RS13040 HMPREF1078_RS13040 tRNA-Phe + no data
HMPREF1078_RS13045 HMPREF1078_RS13045 porin family protein + cofit
HMPREF1078_RS13050 HMPREF1078_RS13050 primosomal protein N' + strong
HMPREF1078_RS13055 HMPREF1078_RS13055 low molecular weight protein-tyrosine-phosphatase + insig.
HMPREF1078_RS13060 HMPREF1078_RS13060 HDIG domain-containing protein - strong
HMPREF1078_RS13065 HMPREF1078_RS13065 glutamate--tRNA ligase + no data
HMPREF1078_RS13070 HMPREF1078_RS13070 glycosyltransferase N-terminal domain-containing protein + no data
HMPREF1078_RS13075 HMPREF1078_RS13075 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS13080 HMPREF1078_RS13080 TonB-dependent receptor + insig.

Or browse nearby genes

Or see the comparative fitness browser