Gene info for HMPREF1078_RS13005 in Parabacteroides merdae CL09T00C40

Annotation: Trk system potassium transporter TrkA
Type 1: Protein-coding gene
Located on scaffold NZ_JH976528, + strand, nucleotides 12,471 to 13,808
See nucleotide sequence around HMPREF1078_RS13005 or for all of scaffold NZ_JH976528

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12985 and HMPREF1078_RS19940 are separated by 62 nucleotidesHMPREF1078_RS19940 and HMPREF1078_RS12990 are separated by 74 nucleotidesHMPREF1078_RS12990 and HMPREF1078_RS12995 are separated by 29 nucleotidesHMPREF1078_RS12995 and HMPREF1078_RS13000 are separated by 416 nucleotidesHMPREF1078_RS13000 and HMPREF1078_RS13005 are separated by 30 nucleotidesHMPREF1078_RS13005 and HMPREF1078_RS13010 are separated by 66 nucleotidesHMPREF1078_RS13010 and HMPREF1078_RS13015 are separated by 80 nucleotidesHMPREF1078_RS13015 and HMPREF1078_RS13020 are separated by 81 nucleotidesHMPREF1078_RS13020 and HMPREF1078_RS13025 are separated by 354 nucleotidesHMPREF1078_RS13025 and HMPREF1078_RS13030 are separated by 270 nucleotides HMPREF1078_RS12985: HMPREF1078_RS12985 - helix-turn-helix domain-containing protein, at 7,432 to 7,719 _RS12985 HMPREF1078_RS19940: HMPREF1078_RS19940 - hypothetical protein, at 7,782 to 8,003 _RS19940 HMPREF1078_RS12990: HMPREF1078_RS12990 - hypothetical protein, at 8,078 to 8,665 _RS12990 HMPREF1078_RS12995: HMPREF1078_RS12995 - phage integrase SAM-like domain-containing protein, at 8,695 to 10,116 _RS12995 HMPREF1078_RS13000: HMPREF1078_RS13000 - 1-deoxy-D-xylulose-5-phosphate synthase, at 10,533 to 12,440 _RS13000 HMPREF1078_RS13005: HMPREF1078_RS13005 - Trk system potassium transporter TrkA, at 12,471 to 13,808 _RS13005 HMPREF1078_RS13010: HMPREF1078_RS13010 - TrkH family potassium uptake protein, at 13,875 to 15,329 _RS13010 HMPREF1078_RS13015: HMPREF1078_RS13015 - Holliday junction branch migration protein RuvA, at 15,410 to 16,003 _RS13015 HMPREF1078_RS13020: HMPREF1078_RS13020 - cell surface protein SprA, at 16,085 to 23,536 _RS13020 HMPREF1078_RS13025: HMPREF1078_RS13025 - uracil-DNA glycosylase, at 23,891 to 24,553 _RS13025 HMPREF1078_RS13030: HMPREF1078_RS13030 - tetraacyldisaccharide 4'-kinase, at 24,824 to 25,936 _RS13030
Locus Name Description Strand Phenotype
HMPREF1078_RS12985 HMPREF1078_RS12985 helix-turn-helix domain-containing protein - no data
HMPREF1078_RS19940 HMPREF1078_RS19940 hypothetical protein - no data
HMPREF1078_RS12990 HMPREF1078_RS12990 hypothetical protein - no data
HMPREF1078_RS12995 HMPREF1078_RS12995 phage integrase SAM-like domain-containing protein - no data
HMPREF1078_RS13000 HMPREF1078_RS13000 1-deoxy-D-xylulose-5-phosphate synthase + no data
HMPREF1078_RS13005 HMPREF1078_RS13005 Trk system potassium transporter TrkA + strong
HMPREF1078_RS13010 HMPREF1078_RS13010 TrkH family potassium uptake protein + strong
HMPREF1078_RS13015 HMPREF1078_RS13015 Holliday junction branch migration protein RuvA + strong
HMPREF1078_RS13020 HMPREF1078_RS13020 cell surface protein SprA + strong
HMPREF1078_RS13025 HMPREF1078_RS13025 uracil-DNA glycosylase - insig.
HMPREF1078_RS13030 HMPREF1078_RS13030 tetraacyldisaccharide 4'-kinase + no data

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