Gene info for HMPREF1078_RS12880 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 610,999 to 611,394
See nucleotide sequence around HMPREF1078_RS12880 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12855 and HMPREF1078_RS12860 are separated by 221 nucleotidesHMPREF1078_RS12860 and HMPREF1078_RS12865 are separated by 129 nucleotidesHMPREF1078_RS12865 and HMPREF1078_RS12870 are separated by 536 nucleotidesHMPREF1078_RS12870 and HMPREF1078_RS12875 overlap by 4 nucleotidesHMPREF1078_RS12875 and HMPREF1078_RS12880 are separated by 13 nucleotidesHMPREF1078_RS12880 and HMPREF1078_RS12885 are separated by 378 nucleotidesHMPREF1078_RS12885 and HMPREF1078_RS12890 are separated by 94 nucleotidesHMPREF1078_RS12890 and HMPREF1078_RS12895 are separated by 197 nucleotidesHMPREF1078_RS12895 and HMPREF1078_RS19925 are separated by 1743 nucleotidesHMPREF1078_RS19925 and HMPREF1078_RS12905 are separated by 104 nucleotides HMPREF1078_RS12855: HMPREF1078_RS12855 - DUF4974 domain-containing protein, at 604,383 to 605,369 _RS12855 HMPREF1078_RS12860: HMPREF1078_RS12860 - RNA polymerase sigma-70 factor, at 605,591 to 606,166 _RS12860 HMPREF1078_RS12865: HMPREF1078_RS12865 - S41 family peptidase, at 606,296 to 609,547 _RS12865 HMPREF1078_RS12870: HMPREF1078_RS12870 - lysine exporter LysO family protein, at 610,084 to 610,710 _RS12870 HMPREF1078_RS12875: HMPREF1078_RS12875 - LysO family transporter, at 610,707 to 610,985 _RS12875 HMPREF1078_RS12880: HMPREF1078_RS12880 - hypothetical protein, at 610,999 to 611,394 _RS12880 HMPREF1078_RS12885: HMPREF1078_RS12885 - GH92 family glycosyl hydrolase, at 611,773 to 614,034 _RS12885 HMPREF1078_RS12890: HMPREF1078_RS12890 - heavy metal-binding domain-containing protein, at 614,129 to 614,449 _RS12890 HMPREF1078_RS12895: HMPREF1078_RS12895 - 5S ribosomal RNA, at 614,647 to 614,757 _RS12895 HMPREF1078_RS19925: HMPREF1078_RS19925 - transposase, at 616,501 to 617,482 _RS19925 HMPREF1078_RS12905: HMPREF1078_RS12905 - transposase, at 617,587 to 617,961 _RS12905
Locus Name Description Strand Phenotype
HMPREF1078_RS12855 HMPREF1078_RS12855 DUF4974 domain-containing protein - cofit
HMPREF1078_RS12860 HMPREF1078_RS12860 RNA polymerase sigma-70 factor - cofit
HMPREF1078_RS12865 HMPREF1078_RS12865 S41 family peptidase + insig.
HMPREF1078_RS12870 HMPREF1078_RS12870 lysine exporter LysO family protein - insig.
HMPREF1078_RS12875 HMPREF1078_RS12875 LysO family transporter - insig.
HMPREF1078_RS12880 HMPREF1078_RS12880 hypothetical protein - insig.
HMPREF1078_RS12885 HMPREF1078_RS12885 GH92 family glycosyl hydrolase + cofit
HMPREF1078_RS12890 HMPREF1078_RS12890 heavy metal-binding domain-containing protein + strong
HMPREF1078_RS12895 HMPREF1078_RS12895 5S ribosomal RNA - no data
HMPREF1078_RS19925 HMPREF1078_RS19925 transposase - insig.
HMPREF1078_RS12905 HMPREF1078_RS12905 transposase - insig.

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