Gene info for HMPREF1078_RS12850 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 600,954 to 604,295
See nucleotide sequence around HMPREF1078_RS12850 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12825 and HMPREF1078_RS12830 are separated by 21 nucleotidesHMPREF1078_RS12830 and HMPREF1078_RS12835 are separated by 113 nucleotidesHMPREF1078_RS12835 and HMPREF1078_RS12840 are separated by 46 nucleotidesHMPREF1078_RS12840 and HMPREF1078_RS12845 are separated by 512 nucleotidesHMPREF1078_RS12845 and HMPREF1078_RS12850 are separated by 23 nucleotidesHMPREF1078_RS12850 and HMPREF1078_RS12855 are separated by 87 nucleotidesHMPREF1078_RS12855 and HMPREF1078_RS12860 are separated by 221 nucleotidesHMPREF1078_RS12860 and HMPREF1078_RS12865 are separated by 129 nucleotidesHMPREF1078_RS12865 and HMPREF1078_RS12870 are separated by 536 nucleotidesHMPREF1078_RS12870 and HMPREF1078_RS12875 overlap by 4 nucleotides HMPREF1078_RS12825: HMPREF1078_RS12825 - dicarboxylate/amino acid:cation symporter, at 593,072 to 594,259 _RS12825 HMPREF1078_RS12830: HMPREF1078_RS12830 - 3'-5' exonuclease, at 594,281 to 594,805 _RS12830 HMPREF1078_RS12835: HMPREF1078_RS12835 - S41 family peptidase, at 594,919 to 598,158 _RS12835 HMPREF1078_RS12840: HMPREF1078_RS12840 - hypothetical protein, at 598,205 to 598,615 _RS12840 HMPREF1078_RS12845: HMPREF1078_RS12845 - RagB/SusD family nutrient uptake outer membrane protein, at 599,128 to 600,930 _RS12845 HMPREF1078_RS12850: HMPREF1078_RS12850 - TonB-dependent receptor, at 600,954 to 604,295 _RS12850 HMPREF1078_RS12855: HMPREF1078_RS12855 - DUF4974 domain-containing protein, at 604,383 to 605,369 _RS12855 HMPREF1078_RS12860: HMPREF1078_RS12860 - RNA polymerase sigma-70 factor, at 605,591 to 606,166 _RS12860 HMPREF1078_RS12865: HMPREF1078_RS12865 - S41 family peptidase, at 606,296 to 609,547 _RS12865 HMPREF1078_RS12870: HMPREF1078_RS12870 - lysine exporter LysO family protein, at 610,084 to 610,710 _RS12870 HMPREF1078_RS12875: HMPREF1078_RS12875 - LysO family transporter, at 610,707 to 610,985 _RS12875
Locus Name Description Strand Phenotype
HMPREF1078_RS12825 HMPREF1078_RS12825 dicarboxylate/amino acid:cation symporter + insig.
HMPREF1078_RS12830 HMPREF1078_RS12830 3'-5' exonuclease - insig.
HMPREF1078_RS12835 HMPREF1078_RS12835 S41 family peptidase - cofit
HMPREF1078_RS12840 HMPREF1078_RS12840 hypothetical protein - insig.
HMPREF1078_RS12845 HMPREF1078_RS12845 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS12850 HMPREF1078_RS12850 TonB-dependent receptor - insig.
HMPREF1078_RS12855 HMPREF1078_RS12855 DUF4974 domain-containing protein - insig.
HMPREF1078_RS12860 HMPREF1078_RS12860 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS12865 HMPREF1078_RS12865 S41 family peptidase + insig.
HMPREF1078_RS12870 HMPREF1078_RS12870 lysine exporter LysO family protein - insig.
HMPREF1078_RS12875 HMPREF1078_RS12875 LysO family transporter - insig.

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