Gene info for HMPREF1078_RS12705 in Parabacteroides merdae CL09T00C40

Annotation: tetratricopeptide repeat protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 565,779 to 566,744
See nucleotide sequence around HMPREF1078_RS12705 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12680 and HMPREF1078_RS12685 are separated by 7 nucleotidesHMPREF1078_RS12685 and HMPREF1078_RS12690 are separated by 1 nucleotidesHMPREF1078_RS12690 and HMPREF1078_RS12695 are separated by 208 nucleotidesHMPREF1078_RS12695 and HMPREF1078_RS19405 are separated by 459 nucleotidesHMPREF1078_RS19405 and HMPREF1078_RS12705 are separated by 194 nucleotidesHMPREF1078_RS12705 and HMPREF1078_RS12710 are separated by 182 nucleotidesHMPREF1078_RS12710 and HMPREF1078_RS12715 are separated by 22 nucleotidesHMPREF1078_RS12715 and HMPREF1078_RS12720 overlap by 1 nucleotidesHMPREF1078_RS12720 and HMPREF1078_RS12725 are separated by 174 nucleotidesHMPREF1078_RS12725 and HMPREF1078_RS12730 are separated by 131 nucleotides HMPREF1078_RS12680: HMPREF1078_RS12680 - DUF1573 domain-containing protein, at 561,580 to 562,443 _RS12680 HMPREF1078_RS12685: HMPREF1078_RS12685 - BF3164 family lipoprotein, at 562,451 to 563,503 _RS12685 HMPREF1078_RS12690: HMPREF1078_RS12690 - NVEALA domain-containing protein, at 563,505 to 563,732 _RS12690 HMPREF1078_RS12695: HMPREF1078_RS12695 - hypothetical protein, at 563,941 to 564,981 _RS12695 HMPREF1078_RS19405: HMPREF1078_RS19405 - hypothetical protein, at 565,441 to 565,584 _RS19405 HMPREF1078_RS12705: HMPREF1078_RS12705 - tetratricopeptide repeat protein, at 565,779 to 566,744 _RS12705 HMPREF1078_RS12710: HMPREF1078_RS12710 - OadG family protein, at 566,927 to 567,208 _RS12710 HMPREF1078_RS12715: HMPREF1078_RS12715 - oxaloacetate decarboxylase, at 567,231 to 569,141 _RS12715 HMPREF1078_RS12720: HMPREF1078_RS12720 - sodium ion-translocating decarboxylase subunit beta, at 569,141 to 570,376 _RS12720 HMPREF1078_RS12725: HMPREF1078_RS12725 - DUF349 domain-containing protein, at 570,551 to 572,464 _RS12725 HMPREF1078_RS12730: HMPREF1078_RS12730 - hypothetical protein, at 572,596 to 573,804 _RS12730
Locus Name Description Strand Phenotype
HMPREF1078_RS12680 HMPREF1078_RS12680 DUF1573 domain-containing protein - insig.
HMPREF1078_RS12685 HMPREF1078_RS12685 BF3164 family lipoprotein - insig.
HMPREF1078_RS12690 HMPREF1078_RS12690 NVEALA domain-containing protein - insig.
HMPREF1078_RS12695 HMPREF1078_RS12695 hypothetical protein + sig.
HMPREF1078_RS19405 HMPREF1078_RS19405 hypothetical protein + insig.
HMPREF1078_RS12705 HMPREF1078_RS12705 tetratricopeptide repeat protein - sig.
HMPREF1078_RS12710 HMPREF1078_RS12710 OadG family protein + insig.
HMPREF1078_RS12715 HMPREF1078_RS12715 oxaloacetate decarboxylase + strong
HMPREF1078_RS12720 HMPREF1078_RS12720 sodium ion-translocating decarboxylase subunit beta + strong
HMPREF1078_RS12725 HMPREF1078_RS12725 DUF349 domain-containing protein + strong
HMPREF1078_RS12730 HMPREF1078_RS12730 hypothetical protein + insig.

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