Gene info for HMPREF1078_RS12580 in Parabacteroides merdae CL09T00C40

Annotation: thioesterase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 528,896 to 529,273
See nucleotide sequence around HMPREF1078_RS12580 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12560 and HMPREF1078_RS12565 are separated by 28 nucleotidesHMPREF1078_RS12565 and HMPREF1078_RS12570 are separated by 97 nucleotidesHMPREF1078_RS12570 and HMPREF1078_RS12575 are separated by 226 nucleotidesHMPREF1078_RS12575 and HMPREF1078_RS18810 are separated by 230 nucleotidesHMPREF1078_RS18810 and HMPREF1078_RS12580 are separated by 345 nucleotidesHMPREF1078_RS12580 and HMPREF1078_RS12585 are separated by 454 nucleotidesHMPREF1078_RS12585 and HMPREF1078_RS12590 are separated by 26 nucleotidesHMPREF1078_RS12590 and HMPREF1078_RS12595 are separated by 407 nucleotidesHMPREF1078_RS12595 and HMPREF1078_RS12600 are separated by 174 nucleotidesHMPREF1078_RS12600 and HMPREF1078_RS12605 overlap by 4 nucleotides HMPREF1078_RS12560: HMPREF1078_RS12560 - RagB/SusD family nutrient uptake outer membrane protein, at 518,700 to 520,658 _RS12560 HMPREF1078_RS12565: HMPREF1078_RS12565 - TonB-dependent receptor, at 520,687 to 524,046 _RS12565 HMPREF1078_RS12570: HMPREF1078_RS12570 - FecR domain-containing protein, at 524,144 to 525,349 _RS12570 HMPREF1078_RS12575: HMPREF1078_RS12575 - TonB-dependent receptor, at 525,576 to 527,957 _RS12575 HMPREF1078_RS18810: HMPREF1078_RS18810 - hypothetical protein, at 528,188 to 528,550 _RS18810 HMPREF1078_RS12580: HMPREF1078_RS12580 - thioesterase family protein, at 528,896 to 529,273 _RS12580 HMPREF1078_RS12585: HMPREF1078_RS12585 - TonB-dependent receptor, at 529,728 to 532,088 _RS12585 HMPREF1078_RS12590: HMPREF1078_RS12590 - Ig-like domain-containing protein, at 532,115 to 533,653 _RS12590 HMPREF1078_RS12595: HMPREF1078_RS12595 - inositol monophosphatase family protein, at 534,061 to 534,849 _RS12595 HMPREF1078_RS12600: HMPREF1078_RS12600 - translocation/assembly module TamB domain-containing protein, at 535,024 to 539,652 _RS12600 HMPREF1078_RS12605: HMPREF1078_RS12605 - BamA/TamA family outer membrane protein, at 539,649 to 541,952 _RS12605
Locus Name Description Strand Phenotype
HMPREF1078_RS12560 HMPREF1078_RS12560 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS12565 HMPREF1078_RS12565 TonB-dependent receptor - cofit
HMPREF1078_RS12570 HMPREF1078_RS12570 FecR domain-containing protein - insig.
HMPREF1078_RS12575 HMPREF1078_RS12575 TonB-dependent receptor - insig.
HMPREF1078_RS18810 HMPREF1078_RS18810 hypothetical protein - insig.
HMPREF1078_RS12580 HMPREF1078_RS12580 thioesterase family protein - insig.
HMPREF1078_RS12585 HMPREF1078_RS12585 TonB-dependent receptor + strong
HMPREF1078_RS12590 HMPREF1078_RS12590 Ig-like domain-containing protein + strong
HMPREF1078_RS12595 HMPREF1078_RS12595 inositol monophosphatase family protein - insig.
HMPREF1078_RS12600 HMPREF1078_RS12600 translocation/assembly module TamB domain-containing protein + strong
HMPREF1078_RS12605 HMPREF1078_RS12605 BamA/TamA family outer membrane protein + strong

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