Gene info for HMPREF1078_RS12565 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 520,687 to 524,046
See nucleotide sequence around HMPREF1078_RS12565 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12540 and HMPREF1078_RS12545 are separated by 154 nucleotidesHMPREF1078_RS12545 and HMPREF1078_RS12550 are separated by 14 nucleotidesHMPREF1078_RS12550 and HMPREF1078_RS12555 are separated by 832 nucleotidesHMPREF1078_RS12555 and HMPREF1078_RS12560 are separated by 59 nucleotidesHMPREF1078_RS12560 and HMPREF1078_RS12565 are separated by 28 nucleotidesHMPREF1078_RS12565 and HMPREF1078_RS12570 are separated by 97 nucleotidesHMPREF1078_RS12570 and HMPREF1078_RS12575 are separated by 226 nucleotidesHMPREF1078_RS12575 and HMPREF1078_RS18810 are separated by 230 nucleotidesHMPREF1078_RS18810 and HMPREF1078_RS12580 are separated by 345 nucleotidesHMPREF1078_RS12580 and HMPREF1078_RS12585 are separated by 454 nucleotides HMPREF1078_RS12540: HMPREF1078_RS12540 - threonine/serine exporter family protein, at 514,053 to 515,402 _RS12540 HMPREF1078_RS12545: HMPREF1078_RS12545 - carboxyl transferase domain-containing protein, at 515,557 to 516,168 _RS12545 HMPREF1078_RS12550: HMPREF1078_RS12550 - acyltransferase, at 516,183 to 517,271 _RS12550 HMPREF1078_RS12555: HMPREF1078_RS12555 - sigma-70 family RNA polymerase sigma factor, at 518,104 to 518,640 _RS12555 HMPREF1078_RS12560: HMPREF1078_RS12560 - RagB/SusD family nutrient uptake outer membrane protein, at 518,700 to 520,658 _RS12560 HMPREF1078_RS12565: HMPREF1078_RS12565 - TonB-dependent receptor, at 520,687 to 524,046 _RS12565 HMPREF1078_RS12570: HMPREF1078_RS12570 - FecR domain-containing protein, at 524,144 to 525,349 _RS12570 HMPREF1078_RS12575: HMPREF1078_RS12575 - TonB-dependent receptor, at 525,576 to 527,957 _RS12575 HMPREF1078_RS18810: HMPREF1078_RS18810 - hypothetical protein, at 528,188 to 528,550 _RS18810 HMPREF1078_RS12580: HMPREF1078_RS12580 - thioesterase family protein, at 528,896 to 529,273 _RS12580 HMPREF1078_RS12585: HMPREF1078_RS12585 - TonB-dependent receptor, at 529,728 to 532,088 _RS12585
Locus Name Description Strand Phenotype
HMPREF1078_RS12540 HMPREF1078_RS12540 threonine/serine exporter family protein - insig.
HMPREF1078_RS12545 HMPREF1078_RS12545 carboxyl transferase domain-containing protein - insig.
HMPREF1078_RS12550 HMPREF1078_RS12550 acyltransferase - insig.
HMPREF1078_RS12555 HMPREF1078_RS12555 sigma-70 family RNA polymerase sigma factor + insig.
HMPREF1078_RS12560 HMPREF1078_RS12560 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS12565 HMPREF1078_RS12565 TonB-dependent receptor - cofit
HMPREF1078_RS12570 HMPREF1078_RS12570 FecR domain-containing protein - insig.
HMPREF1078_RS12575 HMPREF1078_RS12575 TonB-dependent receptor - insig.
HMPREF1078_RS18810 HMPREF1078_RS18810 hypothetical protein - insig.
HMPREF1078_RS12580 HMPREF1078_RS12580 thioesterase family protein - insig.
HMPREF1078_RS12585 HMPREF1078_RS12585 TonB-dependent receptor + strong

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